RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 VWFP04275 2813 aa12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 SMKR1H3BMG3 65 aa12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 CSN3P07498 182 aa12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 RPS20P60866 119 aaKnown RBP12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 BORCS7Q96B45 105 aa12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 RAX2Q96IS3 184 aa12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 TIMM8BQ9Y5J9 83 aaPredicted RBP12.9□□□□□ -0.34
TMEM50B-210ENST00000542230 ID1P41134 155 aa12.89□□□□□ -0.35
TMEM50B-210ENST00000542230 CITED2Q99967 270 aaPredicted RBP12.89□□□□□ -0.35
TMEM50B-210ENST00000542230 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
TMEM50B-210ENST00000542230 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
TMEM50B-210ENST00000542230 ZNF493Q6ZR52 646 aa12.89□□□□□ -0.35
TMEM50B-210ENST00000542230 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
TMEM50B-210ENST00000542230 PAFAH1B2P68402 229 aa12.88□□□□□ -0.35
TMEM50B-210ENST00000542230 ZNF124Q15973 351 aa12.88□□□□□ -0.35
TMEM50B-210ENST00000542230 OR9G4Q8NGQ1 327 aa12.88□□□□□ -0.35
TMEM50B-210ENST00000542230 D6R8Y8 96 aa12.88□□□□□ -0.35
TMEM50B-210ENST00000542230 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
TMEM50B-210ENST00000542230 LENEPQ9Y5L5 61 aa12.88□□□□□ -0.35
TMEM50B-210ENST00000542230 H3BVH4 76 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 GNRH2O43555 120 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 NCR2O95944 276 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 SCGB1D1O95968 90 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 NOTCH3Q9UM47 2321 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 TRAV12-2A0A075B6T6 113 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 ANXA2RQ3ZCQ2 193 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 MRPL51Q4U2R6 128 aaKnown RBP12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
TMEM50B-210ENST00000542230 M0R2Z0 102 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 HILS1P60008 231 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 PRO1933Q9H354 126 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 A0A0J9YX75 114 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 A0A1B0GW15 77 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 TDRG1Q3Y452 100 aa12.86□□□□□ -0.35
TMEM50B-210ENST00000542230 HSBP1O75506 76 aa12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 EVI2AP22794 236 aa12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 SNRPD3P62318 126 aaKnown RBP12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 RNF185Q96GF1 192 aa12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 LINC00587B1AMM8 73 aa12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 KRTDAPP60985 99 aa12.85□□□□□ -0.35
TMEM50B-210ENST00000542230 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 LOC389332A0A1B0GUA5 103 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 KLLNB2CW77 178 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 GATA1P15976 413 aaPredicted RBP12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 MUC4Q99102 2169 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 KNCNA6PVL3 124 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 LINC00173Q6ZV60 143 aa12.84□□□□□ -0.35
TMEM50B-210ENST00000542230 RAB4AP20338 218 aa12.83□□□□□ -0.36
TMEM50B-210ENST00000542230 FXYD7P58549 80 aa12.83□□□□□ -0.36
TMEM50B-210ENST00000542230 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.36
TMEM50B-210ENST00000542230 CCL24O00175 119 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 LINC00614P0C842 121 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 IFI27P40305 119 aaPredicted RBP12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 SPINK13Q1W4C9 94 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 CD300EQ496F6 205 aaPredicted RBP12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 Q8N976 141 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 C16orf95Q9H693 158 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 U3KQK5 164 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 ATRQ13535 2644 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 F8P00451 2351 aa12.82□□□□□ -0.36
TMEM50B-210ENST00000542230 IGHV1-24A0A0C4DH33 117 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 NPYP01303 97 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 DEFB131AP59861 70 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 PRELID3AQ96N28 172 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 PEMTQ9UBM1 199 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 TRAV26-2A0A0B4J265 109 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 M0R381 172 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 C3orf79P0CE67 100 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 CKS2P33552 79 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 TMEM160Q9NX00 188 aa12.81□□□□□ -0.36
TMEM50B-210ENST00000542230 SNAI2O43623 268 aa12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 OR5AL1P0C617 328 aa12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 FHL3Q13643 280 aa12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 TEP1Q99973 2627 aaKnown RBP12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
TMEM50B-210ENST00000542230 TRRAPQ9Y4A5 3859 aa12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 S100A4P26447 101 aaKnown RBP12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 SPATA12Q7Z6I5 190 aa12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 DYNLRB2Q8TF09 96 aa12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 SIGLEC8Q9NYZ4 499 aa12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
TMEM50B-210ENST00000542230 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
TMEM50B-210ENST00000542230 TSSC4Q9Y5U2 329 aaPredicted RBP12.78□□□□□ -0.36
TMEM50B-210ENST00000542230 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
TMEM50B-210ENST00000542230 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
TMEM50B-210ENST00000542230 PRM2P04554 102 aa12.78□□□□□ -0.36
TMEM50B-210ENST00000542230 DNLZQ5SXM8 178 aa12.78□□□□□ -0.36
TMEM50B-210ENST00000542230 C7orf71A4D174 169 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms