RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 FABP5P3A8MUU1 101 aa14.93□□□□□ -0.02
CAPN1-226ENST00000533820 TNFRSF18Q9Y5U5 241 aa14.93□□□□□ -0.02
CAPN1-226ENST00000533820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.92□□□□□ -0.022e-8■■■□□ 16
CAPN1-226ENST00000533820 TNFRSF6BO95407 300 aa14.92□□□□□ -0.02
CAPN1-226ENST00000533820 TRGV3P03979 118 aa14.92□□□□□ -0.02
CAPN1-226ENST00000533820 ATP5J2P56134 94 aa14.92□□□□□ -0.02
CAPN1-226ENST00000533820 PAX8Q06710 450 aa14.91□□□□□ -0.02
CAPN1-226ENST00000533820 APOMO95445 188 aa14.91□□□□□ -0.02
CAPN1-226ENST00000533820 C11orf21Q9P2W6 132 aa14.91□□□□□ -0.02
CAPN1-226ENST00000533820 ATP6V0E1O15342 81 aa14.91□□□□□ -0.02
CAPN1-226ENST00000533820 FOXC2Q99958 501 aa14.91□□□□□ -0.02
CAPN1-226ENST00000533820 MSRB2Q9Y3D2 182 aa14.91□□□□□ -0.02
CAPN1-226ENST00000533820 M0R1W7 72 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 GAGE13Q4V321 117 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 GTSCR1Q86UQ5 136 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 Q8N9W7 124 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 PRSS29PA6NIE9 313 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 K7ENP7 123 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 FHL3Q13643 280 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 Q6ZUT4 128 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 DTX2Q86UW9 622 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 TMEM158Q8WZ71 300 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 TM2D2Q9BX73 214 aa14.9□□□□□ -0.02
CAPN1-226ENST00000533820 IGHV3OR16-10A0A075B7F0 116 aa14.89□□□□□ -0.03
CAPN1-226ENST00000533820 AGPAT4-IT1Q9H0P7 198 aa14.89□□□□□ -0.03
CAPN1-226ENST00000533820 OR4X2Q8NGF9 303 aa14.89□□□□□ -0.03
CAPN1-226ENST00000533820 IGKV3D-20A0A0C4DH25 116 aa14.88□□□□□ -0.03
CAPN1-226ENST00000533820 YAE1D1Q9NRH1 226 aa14.88□□□□□ -0.03
CAPN1-226ENST00000533820 BUB3O43684 328 aa14.88□□□□□ -0.03
CAPN1-226ENST00000533820 LCNL1Q6ZST4 164 aa14.88□□□□□ -0.03
CAPN1-226ENST00000533820 TMEM160Q9NX00 188 aa14.88□□□□□ -0.03
CAPN1-226ENST00000533820 TRBV20-1A0A075B6N2 111 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 ADORA2A-AS1P86434 159 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 TMEM219Q86XT9 240 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 Q8N6K4 173 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 DEFB1P60022 68 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 OR9G4Q8NGQ1 327 aa14.87□□□□□ -0.03
CAPN1-226ENST00000533820 A0A1W2PPR1 153 aa14.86□□□□□ -0.03
CAPN1-226ENST00000533820 CCDC179H3BU77 68 aa14.86□□□□□ -0.03
CAPN1-226ENST00000533820 ZNF502Q8TBZ5 544 aa14.86□□□□□ -0.03
CAPN1-226ENST00000533820 KLK15Q9H2R5 256 aa14.86□□□□□ -0.03
CAPN1-226ENST00000533820 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-226ENST00000533820 ZFAND3Q9H8U3 227 aa14.85□□□□□ -0.03
CAPN1-226ENST00000533820 AGRNO00468 2067 aa14.85□□□□□ -0.03
CAPN1-226ENST00000533820 CCDC140Q96MF4 163 aa14.85□□□□□ -0.03
CAPN1-226ENST00000533820 IGKV3-7A0A075B6H7 116 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 IGF1P05019 195 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 FCER1GP30273 86 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 SAA4P35542 130 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 ZC2HC1BQ5TFG8 222 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 DEFB104AQ8WTQ1 72 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 DPF1Q92782 380 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 FOXI1Q12951 378 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 TRAV40A0A0B4J280 105 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 TMEM8BA6NDV4 472 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 PF4V1P10720 104 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 EFNA4P52798 201 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 TMEM78Q5T7P6 136 aa14.84□□□□□ -0.03
CAPN1-226ENST00000533820 CLPSL1A2RUU4 121 aa14.83□□□□□ -0.04
CAPN1-226ENST00000533820 COX8CQ7Z4L0 72 aa14.83□□□□□ -0.04
CAPN1-226ENST00000533820 IGLL5B9A064 214 aa14.83□□□□□ -0.04
CAPN1-226ENST00000533820 H3BVH4 76 aa14.83□□□□□ -0.04
CAPN1-226ENST00000533820 SPANXN1Q5VSR9 72 aa14.83□□□□□ -0.04
CAPN1-226ENST00000533820 HHLA3Q9XRX5 114 aa14.83□□□□□ -0.04
CAPN1-226ENST00000533820 CSPG4Q6UVK1 2322 aa14.82□□□□□ -0.04
CAPN1-226ENST00000533820 VPS13CQ709C8 3753 aa14.82□□□□□ -0.04
CAPN1-226ENST00000533820 IGKCP01834 107 aa14.82□□□□□ -0.04
CAPN1-226ENST00000533820 KIR2DL4Q99706 377 aa14.82□□□□□ -0.04
CAPN1-226ENST00000533820 UBTD1Q9HAC8 227 aa14.82□□□□□ -0.04
CAPN1-226ENST00000533820 NXT2Q9NPJ8 142 aaKnown RBP14.82□□□□□ -0.04
CAPN1-226ENST00000533820 C11orf71Q6IPW1 123 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 MRPL35Q9NZE8 188 aaKnown RBP14.81□□□□□ -0.04
CAPN1-226ENST00000533820 TRAV8-2A0A0B4J237 113 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 M0QXV9 152 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 NHLRC4P0CG21 123 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-226ENST00000533820 LINC01559Q495D7 138 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 ZFAND6Q6FIF0 208 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 SFTA2Q6UW10 78 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 C3orf56Q8N813 242 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 FAM110DQ8TAY7 271 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-226ENST00000533820 PHLDA1Q8WV24 401 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-226ENST00000533820 PTH2Q96A98 100 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 PPDPFQ9H3Y8 114 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 NFE4Q86UQ8 179 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 TEX29Q8N6K0 151 aa14.81□□□□□ -0.04
CAPN1-226ENST00000533820 E9PLD3 99 aa14.8□□□□□ -0.04
CAPN1-226ENST00000533820 TMEM190Q8WZ59 177 aa14.8□□□□□ -0.04
CAPN1-226ENST00000533820 CHAC1Q9BUX1 264 aa14.8□□□□□ -0.04
CAPN1-226ENST00000533820 SIRPDQ9H106 197 aa14.8□□□□□ -0.04
CAPN1-226ENST00000533820 RAXQ9Y2V3 346 aa14.8□□□□□ -0.04
CAPN1-226ENST00000533820 M0R381 172 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 FBXL19-AS1Q494R0 122 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 MINOS1Q5TGZ0 78 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 MINOS1-NBL1R4GNA1 71 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 CREBBPQ92793 2442 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 EBI3Q14213 229 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 C16orf92Q96LL3 132 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 PSMG3-AS1Q96PY0 264 aa14.79□□□□□ -0.04
CAPN1-226ENST00000533820 METTL26Q96S19 204 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms