RNA–Protein interactions for RNA: ENST00000533341.2

GRAMD1B-209, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-209ENST00000533341 TMED6Q8WW62 240 aa13.52□□□□□ -0.25
GRAMD1B-209ENST00000533341 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
GRAMD1B-209ENST00000533341 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
GRAMD1B-209ENST00000533341 ZNF479Q96JC4 524 aa13.51□□□□□ -0.25
GRAMD1B-209ENST00000533341 KRTAP4-5Q9BYR2 181 aa13.51□□□□□ -0.25
GRAMD1B-209ENST00000533341 LRP1BQ9NZR2 4599 aa13.51□□□□□ -0.25
GRAMD1B-209ENST00000533341 EREGO14944 169 aa13.5□□□□□ -0.25
GRAMD1B-209ENST00000533341 KRTAP10-2P60368 255 aa13.5□□□□□ -0.25
GRAMD1B-209ENST00000533341 AKR1C8PQ5T2L2 129 aa13.5□□□□□ -0.25
GRAMD1B-209ENST00000533341 Q6ZNX1 250 aa13.5□□□□□ -0.25
GRAMD1B-209ENST00000533341 RASL10AQ92737 203 aa13.5□□□□□ -0.25
GRAMD1B-209ENST00000533341 TMEM167BQ9NRX6 74 aa13.5□□□□□ -0.25
GRAMD1B-209ENST00000533341 TRAV9-2A0A087WT02 112 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 KANTRA0A1W2PQU2 76 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 CXorf1O96002 111 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 STAG3L2P0CL84 134 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 STAG3L3P0CL85 134 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 GYPEP15421 78 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 OR4C5Q8NGB2 326 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 SH3BGRL3Q9H299 93 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 TREM1Q9NP99 234 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 ABCA13Q86UQ4 5058 aa13.49□□□□□ -0.25
GRAMD1B-209ENST00000533341 F6UZH7 168 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 SMLR1H3BR10 107 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 K7EQD1 137 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 GNRH2O43555 120 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 ORM1P02763 201 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 LY96Q9Y6Y9 160 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 HSPG2P98160 4391 aa13.48□□□□□ -0.25
GRAMD1B-209ENST00000533341 M0R2P5 195 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 ARL14EPLP0DKL9 152 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 GNG5P63218 68 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 TCTE3Q8IZS6 198 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 NDFIP1Q9BT67 221 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 CYTL1Q9NRR1 136 aa13.47□□□□□ -0.25
GRAMD1B-209ENST00000533341 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 TRAV4A0A0B4J268 109 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 SERTM2A0A1B0GWG4 89 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 C9JCJ5 164 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 ERVFC1-1P60608 527 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 TDRG1Q3Y452 100 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 OR11H4Q8NGC9 324 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 SUN5Q8TC36 379 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 KCNS1Q96KK3 526 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 SGK494Q96LW2 274 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 TXNDC17Q9BRA2 123 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 TNFRSF18Q9Y5U5 241 aa13.46□□□□□ -0.25
GRAMD1B-209ENST00000533341 IGHV3-16A0A0C4DH30 117 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 CTXND1A0A1B0GTU2 59 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 UMAD1C9J7I0 102 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 PFDN1O60925 122 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 TYMSP04818 313 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 SEC11BP0C7V7 166 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 EVI2AP22794 236 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 GCHFRP30047 84 aa13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 Q6ZRN7 208 aaPredicted RBP13.45□□□□□ -0.26
GRAMD1B-209ENST00000533341 K7EQM0 130 aa13.44□□□□□ -0.26
GRAMD1B-209ENST00000533341 BCL2L11O43521 198 aa13.44□□□□□ -0.26
GRAMD1B-209ENST00000533341 STOML3Q8TAV4 291 aa13.44□□□□□ -0.26
GRAMD1B-209ENST00000533341 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
GRAMD1B-209ENST00000533341 ZNF471Q9BX82 626 aaPredicted RBP13.44□□□□□ -0.26
GRAMD1B-209ENST00000533341 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
GRAMD1B-209ENST00000533341 EIF5AL1Q6IS14 154 aaKnown RBP13.43□□□□□ -0.26
GRAMD1B-209ENST00000533341 WFDC10BQ8IUB3 73 aa13.43□□□□□ -0.26
GRAMD1B-209ENST00000533341 NHLRC2Q8NBF2 726 aa13.43□□□□□ -0.26
GRAMD1B-209ENST00000533341 SCRT2Q9NQ03 307 aa13.43□□□□□ -0.26
GRAMD1B-209ENST00000533341 PGPEP1Q9NXJ5 209 aa13.43□□□□□ -0.26
GRAMD1B-209ENST00000533341 DNAH5Q8TE73 4624 aa13.43□□□□□ -0.26
GRAMD1B-209ENST00000533341 TMUB2Q71RG4 321 aa13.42□□□□□ -0.26
GRAMD1B-209ENST00000533341 Q8N1X5 172 aa13.42□□□□□ -0.26
GRAMD1B-209ENST00000533341 C5orf17Q8NAS9 161 aa13.42□□□□□ -0.26
GRAMD1B-209ENST00000533341 A0A1W2PRE2 83 aa13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 FBLL1A6NHQ2 334 aaKnown RBP13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 TPT1P13693 172 aaKnown RBP13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 DPPA3Q6W0C5 159 aa13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 SH2D6Q7Z4S9 175 aa13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 AKAP14Q86UN6 197 aa13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 MSRB1Q9NZV6 116 aa13.41□□□□□ -0.26
GRAMD1B-209ENST00000533341 LOC100131303A0A0U1RQF7 123 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 K7EP13 123 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 C1QBP02746 253 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 TCRAP04437 139 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 PPT1P50897 306 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 ZFP69Q49AA0 526 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 PSG8Q9UQ74 426 aa13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 APOBP04114 4563 aaKnown RBP13.4□□□□□ -0.26
GRAMD1B-209ENST00000533341 GCGP01275 180 aa13.39□□□□□ -0.27
GRAMD1B-209ENST00000533341 FUSP35637 526 aaKnown RBP eCLIP13.39□□□□□ -0.27
GRAMD1B-209ENST00000533341 ZNF876PQ49A33 203 aa13.39□□□□□ -0.27
GRAMD1B-209ENST00000533341 CRYGDP07320 174 aa13.38□□□□□ -0.27
GRAMD1B-209ENST00000533341 DNAH10OSP0CZ25 163 aa13.38□□□□□ -0.27
GRAMD1B-209ENST00000533341 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
GRAMD1B-209ENST00000533341 LGALSLQ3ZCW2 172 aaPredicted RBP13.38□□□□□ -0.27
GRAMD1B-209ENST00000533341 PRNTQ86SH4 94 aa13.38□□□□□ -0.27
GRAMD1B-209ENST00000533341 C10orf126Q8N4M7 172 aa13.38□□□□□ -0.27
GRAMD1B-209ENST00000533341 MAP1LC3B2A6NCE7 125 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms