RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
CTNND1-213ENST00000526357 XIRP1Q702N8 1843 aaKnown RBP7.41□□□□□ -1.22
CTNND1-213ENST00000526357 MDC1Q14676 2089 aaKnown RBP7.41□□□□□ -1.22
CTNND1-213ENST00000526357 H0Y9J4 135 aa7.4□□□□□ -1.22
CTNND1-213ENST00000526357 TMEM61Q8N0U2 210 aa7.4□□□□□ -1.22
CTNND1-213ENST00000526357 GP9P14770 177 aa7.4□□□□□ -1.22
CTNND1-213ENST00000526357 PSME4Q14997 1843 aa7.4□□□□□ -1.22
CTNND1-213ENST00000526357 PRR30Q53SZ7 412 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-213ENST00000526357 DEFB125Q8N687 156 aa7.4□□□□□ -1.22
CTNND1-213ENST00000526357 IGLV3-9A0A075B6K5 115 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 C15orf65H3BRN8 121 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 TAX1BP3O14907 124 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 DIRC1Q969H9 104 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 KLK5Q9Y337 293 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-213ENST00000526357 ASXL3Q9C0F0 2248 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 IGLV10-54A0A075B6I4 117 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 AGPAT4-IT1Q9H0P7 198 aa7.4□□□□□ -1.23
CTNND1-213ENST00000526357 IGFL3Q6UXB1 125 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 CASC2Q6XLA1 102 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 Q6ZR03 302 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 TRBV12-3P01733 135 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 C10orf91Q5T1B1 145 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 DEFB112Q30KQ8 113 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 ARTNQ5T4W7 220 aa7.39□□□□□ -1.23
CTNND1-213ENST00000526357 PDE6GP18545 87 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 APRG1Q8IVJ8 170 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 SEM1Q6ZVN7 128 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 NPBQ8NG41 125 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 SNRNP200O75643 2136 aaKnown RBP7.38□□□□□ -1.23
CTNND1-213ENST00000526357 K7EN84 100 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 PRR20EP86478 221 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 PRR20CP86479 221 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 PRR20DP86480 221 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 PRR20BP86481 221 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 PRR20AP86496 221 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 RALGAPA2Q2PPJ7 1873 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 C17orf77Q96MU5 243 aa7.38□□□□□ -1.23
CTNND1-213ENST00000526357 IGHV2-5P01817 119 aa7.37□□□□□ -1.23
CTNND1-213ENST00000526357 KAAG1Q9UBP8 84 aa7.37□□□□□ -1.23
CTNND1-213ENST00000526357 CHD5Q8TDI0 1954 aa7.37□□□□□ -1.23
CTNND1-213ENST00000526357 PTPRZ1P23471 2315 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-213ENST00000526357 FGF23Q9GZV9 251 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-213ENST00000526357 A4D1N5 150 aa7.37□□□□□ -1.23
CTNND1-213ENST00000526357 BRK1Q8WUW1 75 aa7.37□□□□□ -1.23
CTNND1-213ENST00000526357 RPL39LQ96EH5 51 aaKnown RBP7.37□□□□□ -1.23
CTNND1-213ENST00000526357 WDR90Q96KV7 1748 aa7.37□□□□□ -1.23
CTNND1-213ENST00000526357 LGALS9O00182 355 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 IGHV4-59P01825 116 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 LOC285556D6RIA3 1793 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 IGLV1-44P01699 117 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 SLURP1P55000 103 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 DIAPH2-AS1Q14236 149 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 TEN1Q86WV5 123 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 HHLA3Q9XRX5 114 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 POLR2AP24928 1970 aaKnown RBP7.36□□□□□ -1.23
CTNND1-213ENST00000526357 KNL1Q8NG31 2342 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 TRBV10-2A0A0K0K1G8 114 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 ASPHD1Q5U4P2 390 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 RNF183Q96D59 192 aa7.36□□□□□ -1.23
CTNND1-213ENST00000526357 LECT2O14960 151 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 KIR2DL5BA0A0G2JN68 375 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 KIR2DL5BA0A0G2JPC4 375 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 A0A0J9YXV3 536 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 CRYGBP07316 175 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 KIR2DL5AQ8N109 375 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 COX7BP24311 80 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 C14orf177Q52M58 125 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
CTNND1-213ENST00000526357 TRBV7-3A0A075B6L6 115 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 GATA1P15976 413 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-213ENST00000526357 DEFB136Q30KP8 78 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 ARID2Q68CP9 1835 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 GREB1LQ9C091 1923 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-213ENST00000526357 SPAG11BQ08648 103 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 GPHB5Q86YW7 130 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 IL17DQ8TAD2 202 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 TOMM6Q96B49 74 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 PRR15LQ9BU68 103 aa7.34□□□□□ -1.23
CTNND1-213ENST00000526357 PDCD11Q14690 1871 aaKnown RBP7.34□□□□□ -1.23
CTNND1-213ENST00000526357 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.24
CTNND1-213ENST00000526357 KIR2DL5BQ8NHK3 375 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 FAM110AQ9BQ89 295 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 PLXNA1Q9UIW2 1896 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 H3BT86 120 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 C16orf54Q6UWD8 224 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 CENPVL3A0A0U1RRI6 287 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 C11orf86A6NJI1 115 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 DEFB113Q30KQ7 82 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 UPK3BQ9BT76 320 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 HIGD1BQ9P298 99 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 PRSS33Q8NF86 280 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 FHL1Q13642 323 aa7.33□□□□□ -1.24
CTNND1-213ENST00000526357 NYNRINQ9P2P1 1898 aaKnown RBP7.32□□□□□ -1.24
CTNND1-213ENST00000526357 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
CTNND1-213ENST00000526357 RNF138Q8WVD3 245 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms