RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 NDUFS6O75380 124 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 TYMSP04818 313 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 RPL35P42766 123 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 LGALS9BQ3B8N2 356 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 ZNF506Q5JVG8 444 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 BAGE2Q86Y30 109 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 C18orf15Q96N68 181 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 SPXQ9BT56 116 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 C11orf21Q9P2W6 132 aa9.78□□□□□ -0.84
CTNNA1-226ENST00000521368 SPINK4O60575 86 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 TCTAP57738 103 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 ZNF674Q2M3X9 581 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 SMIM12Q96EX1 92 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 DERL1Q9BUN8 251 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
CTNNA1-226ENST00000521368 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 TMEM250H0YL14 139 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 GNRH2O43555 120 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 ATP5G1P05496 136 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 CRIP1P50238 77 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 Q6ZTI0 123 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 FAM210BQ96KR6 192 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 MED9Q9NWA0 146 aa9.76□□□□□ -0.85
CTNNA1-226ENST00000521368 GAGE12BA1L429 117 aa9.75□□□□□ -0.85
CTNNA1-226ENST00000521368 SH2D1AO60880 128 aa9.75□□□□□ -0.85
CTNNA1-226ENST00000521368 GAGE7O76087 117 aa9.75□□□□□ -0.85
CTNNA1-226ENST00000521368 GAGE12FP0CL80 117 aa9.75□□□□□ -0.85
CTNNA1-226ENST00000521368 GAGE12GP0CL81 117 aa9.75□□□□□ -0.85
CTNNA1-226ENST00000521368 GAGE12IP0CL82 117 aa9.75□□□□□ -0.85
CTNNA1-226ENST00000521368 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 GNG4P50150 75 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 CENPWQ5EE01 88 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 TOR2AQ5JU69 321 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-226ENST00000521368 TRGV2A0A075B6R0 118 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 IGHV4-4A0A075B6R2 117 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 B4DEV8 164 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 IGLL5B9A064 214 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 ORM1P02763 201 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 RASL10AQ92737 203 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 C9orf85Q96MD7 179 aa9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 DYNC2H1Q8NCM8 4307 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-226ENST00000521368 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 TRBV20OR9-2A0A075B6H5 130 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 C9JCJ5 164 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 M0R2P5 195 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 HTN3P15516 51 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 ASIPP42127 132 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 PTH2Q96A98 100 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 BIN3Q9NQY0 253 aa9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-226ENST00000521368 CXCL1P09341 107 aa9.71□□□□□ -0.86
CTNNA1-226ENST00000521368 PCNPQ8WW12 178 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-226ENST00000521368 PARLQ9H300 379 aa9.71□□□□□ -0.86
CTNNA1-226ENST00000521368 IL36BQ9NZH7 164 aa9.71□□□□□ -0.86
CTNNA1-226ENST00000521368 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
CTNNA1-226ENST00000521368 F5H768 121 aa9.7□□□□□ -0.86
CTNNA1-226ENST00000521368 M0R036 132 aa9.7□□□□□ -0.86
CTNNA1-226ENST00000521368 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-226ENST00000521368 PIK3CD-AS1Q5SR53 167 aa9.7□□□□□ -0.86
CTNNA1-226ENST00000521368 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
CTNNA1-226ENST00000521368 SMDT1Q9H4I9 107 aa9.7□□□□□ -0.86
CTNNA1-226ENST00000521368 LCE6AA0A183 80 aa9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 SRP19P09132 144 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 MGST1P10620 155 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 RAB14P61106 215 aa9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 TMEM88Q6PEY1 159 aa9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 C15orf53Q8NAA6 179 aa9.69□□□□□ -0.86
CTNNA1-226ENST00000521368 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 C19orf71A6NCJ1 209 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 H3BNG1 76 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 MED14OSP0DP75 135 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 HOXA5P20719 270 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 OR5I1Q13606 314 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 DAZAP1Q96EP5 407 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-226ENST00000521368 PLECQ15149 4684 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-226ENST00000521368 PGPEP1LA6NFU8 196 aa9.67□□□□□ -0.86
CTNNA1-226ENST00000521368 H3BVH4 76 aa9.67□□□□□ -0.86
CTNNA1-226ENST00000521368 CIDEAO60543 219 aa9.67□□□□□ -0.86
CTNNA1-226ENST00000521368 ARMS2P0C7Q2 107 aa9.67□□□□□ -0.86
CTNNA1-226ENST00000521368 SLAQ13239 276 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms