RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 MAXP61244 160 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 RBM3P98179 157 aaKnown RBP0.58□□□□□ -2.32
SKP1-205ENST00000519054 ZNF345Q14585 488 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 HIST3H3Q16695 136 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 ACOT6Q3I5F7 207 aaPredicted RBP0.58□□□□□ -2.32
SKP1-205ENST00000519054 GLT8D1Q68CQ7 371 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 C8orf74Q6P047 294 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 OR8B3Q8NGG8 313 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 C4orf3Q8WVX3 66 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 ITFG2Q969R8 447 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 ARL5BQ96KC2 179 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 PPP1R2P1Q96PQ5 205 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 DERL1Q9BUN8 251 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 BAIAP2Q9UQB8 552 aa0.58□□□□□ -2.32
SKP1-205ENST00000519054 MEIKINA0A087WXM9 373 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 IRGMA1A4Y4 181 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 FABP5P3A8MUU1 101 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 F8W036 122 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 CHP2O43745 196 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 NOS1APO75052 506 aaPredicted RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 AHSA1O95433 338 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 RPSAP08865 295 aaKnown RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 HTN3P15516 51 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 RPS4Y1P22090 263 aaKnown RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 HAAOP46952 286 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 ERVS71-1P61550 626 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 ZNF846Q147U1 533 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 AADACL3Q5VUY0 350 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 Q6ZS49 121 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 KRTAP8-1Q8IUC2 63 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 OR8J2Q8NGG1 315 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 OR52L1Q8NGH7 329 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 PFN4Q8NHR9 129 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 ADAT1Q9BUB4 502 aaKnown RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 WDR61Q9GZS3 305 aaKnown RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 CST9LQ9H4G1 147 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 PARVGQ9HBI0 331 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 MRPL27Q9P0M9 148 aaKnown RBP0.57□□□□□ -2.32
SKP1-205ENST00000519054 PKIGQ9Y2B9 76 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 ARL5AQ9Y689 179 aa0.57□□□□□ -2.32
SKP1-205ENST00000519054 IGKV2D-26A0A0A0MRZ7 120 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 FAAHO00519 579 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 SLC22A1O15245 554 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 GLRXP35754 106 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 RPS20P60866 119 aaKnown RBP0.56□□□□□ -2.32
SKP1-205ENST00000519054 ELOBQ15370 118 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 GRK1Q15835 563 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 PTRHD1Q6GMV3 140 aaKnown RBP0.56□□□□□ -2.32
SKP1-205ENST00000519054 Q6ZQT0 140 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 Q8N814 137 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 MORN4Q8NDC4 146 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 MRPL30Q8TCC3 161 aaKnown RBP0.56□□□□□ -2.32
SKP1-205ENST00000519054 RASSF5Q8WWW0 418 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 IMP4Q96G21 291 aaKnown RBP0.56□□□□□ -2.32
SKP1-205ENST00000519054 PRTFDC1Q9NRG1 225 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 MED11Q9P086 117 aa0.56□□□□□ -2.32
SKP1-205ENST00000519054 LSM5Q9Y4Y9 91 aaKnown RBP0.56□□□□□ -2.32
SKP1-205ENST00000519054 A0A1B0GV50 99 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 PSMD12O00232 456 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 HLA-DRB1P01911 266 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 PMP2P02689 132 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 CTSDP07339 412 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 NFYAP23511 347 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BOP23527 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BBP33778 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 RPL5P46777 297 aaKnown RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 CCL18P55774 89 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 DSCR4P56555 118 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BDP58876 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 SPCS3P61009 180 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BCP62807 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 RUNX1Q01196 453 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 STX5Q13190 355 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 WFDC2Q14508 124 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 SURF2Q15527 256 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST2H2BEQ16778 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 CCSMST1Q4G0I0 132 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST2H3PS2Q5TEC6 136 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 LCN15Q6UWW0 184 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 PHF13Q86YI8 300 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 C12orf45Q8N5I9 185 aaPredicted RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 TERB2Q8NHR7 220 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 C11orf40Q8WZ69 217 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BHQ93079 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 OR52E6Q96RD3 313 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BNQ99877 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 HIST1H2BMQ99879 126 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 NIPSNAP1Q9BPW8 284 aa0.55□□□□□ -2.32
SKP1-205ENST00000519054 MRPS26Q9BYN8 205 aaKnown RBP0.55□□□□□ -2.32
SKP1-205ENST00000519054 A0A087WUJ7 227 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 TRAV3A0A0B4J244 114 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 A0A1B0GW64 132 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 TMEM212A6NML5 194 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 BUB1B-PAK6H3BSN5 160 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 M0R036 132 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 SDCBPO00560 298 aaPredicted RBP0.54□□□□□ -2.32
SKP1-205ENST00000519054 SERPINA6P08185 405 aa0.54□□□□□ -2.32
SKP1-205ENST00000519054 METTL15P1P0C7V9 234 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms