RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495		B4DEV8	164 aa		11.34	□□□□□ -0.59
SH3TC1-223	ENST00000513495	DEFB4A	O15263	64 aa		11.34	□□□□□ -0.59
SH3TC1-223	ENST00000513495	IBA57	Q5T440	356 aa	Known RBP	11.34	□□□□□ -0.59
SH3TC1-223	ENST00000513495	RNASE8	Q8TDE3	154 aa	Known RBP	11.34	□□□□□ -0.59
SH3TC1-223	ENST00000513495	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.34	□□□□□ -0.59
SH3TC1-223	ENST00000513495		C9JQL5	133 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495		M0R036	132 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495		P01737	135 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	SPART-AS1	P0CW21	52 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	AZU1	P20160	251 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	S100A4	P26447	101 aa	Known RBP	11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	CRIP1	P50238	77 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495		Q6ZQT7	251 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	OCC1	Q8TAD7	63 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	NAT8	Q9UHE5	227 aa		11.33	□□□□□ -0.6
SH3TC1-223	ENST00000513495	XKRY2	A2RUG3	117 aa		11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	CXorf65	A6NEN9	183 aa		11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	IGLV2-8	P01709	118 aa		11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	ASIP	P42127	132 aa		11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	RPS20	P60866	119 aa	Known RBP	11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	LINC01559	Q495D7	138 aa		11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	IL17D	Q8TAD2	202 aa		11.32	□□□□□ -0.6
SH3TC1-223	ENST00000513495	LYRM9	A8MSI8	78 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	PRM2	P04554	102 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TYMS	P04818	313 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	LINC01551	Q86U37	167 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	C11orf45	Q8TAV5	145 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	SPX	Q9BT56	116 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	GSN-AS1	Q9NRJ2	163 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TP53TG3	Q9ULZ0	132 aa		11.31	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TMSB15B	A0A087X1C1	80 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	KRBOX1	C9JBD0	128 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	GNRH2	O43555	120 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TCL1A	P56279	114 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	ERVFC1-1	P60608	527 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	DAZ2	Q13117	558 aa	Known RBP	11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	ADIRF	Q15847	76 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	NOP10	Q9NPE3	64 aa	Known RBP	11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	C11orf21	Q9P2W6	132 aa		11.3	□□□□□ -0.6
SH3TC1-223	ENST00000513495	IGKV3D-20	A0A0C4DH25	116 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	IGHV3-16	A0A0C4DH30	117 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	C19orf71	A6NCJ1	209 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495		K7EN84	100 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	FAM222A	Q5U5X8	452 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	C15orf54	Q8N8G6	183 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	C11orf72	Q8NBR9	251 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	OR2D3	Q8NGH3	330 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	EDA2R	Q9HAV5	297 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	DKK2	Q9UBU2	259 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TENM3	Q9P273	2699 aa		11.29	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TMEM218	A2RU14	115 aa		11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495		F8W036	122 aa		11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	CXCL1	P09341	107 aa		11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	DAD1	P61803	113 aa		11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	PNRC1	Q12796	327 aa	Predicted RBP	11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	FAM231D	Q6ZW35	169 aa		11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	MDFIC	Q9P1T7	246 aa		11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	PRKDC	P78527	4128 aa	Known RBP	11.28	□□□□□ -0.6
SH3TC1-223	ENST00000513495	TRGV1	A0A0A0MS02	117 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	PLAC8L1	A1L4L8	177 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GRIFIN	A4D1Z8	144 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GATC	O43716	136 aa	Known RBP	11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	DEFB130B	P0DP73	79 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	DEFB130A	P0DP74	79 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	RPL23	P62829	140 aa	Known RBP	11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	LGALS9B	Q3B8N2	356 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	NUDT10	Q8NFP7	164 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	NUDT11	Q96G61	164 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	WWC2-AS2	Q96NR7	200 aa		11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	RNASE7	Q9H1E1	156 aa	Known RBP	11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495	RPP21	Q9H633	154 aa	Known RBP	11.27	□□□□□ -0.61
SH3TC1-223	ENST00000513495		M0R2P5	195 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	RPL19	P84098	196 aa	Known RBP	11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	NDUFA5	Q16718	116 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	DNLZ	Q5SXM8	178 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	SYT8	Q8NBV8	401 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	ISOC2	Q96AB3	205 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	OSTC	Q9NRP0	149 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	IL36B	Q9NZH7	164 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	PHLDA3	Q9Y5J5	127 aa		11.26	□□□□□ -0.61
SH3TC1-223	ENST00000513495	TRGV2	A0A075B6R0	118 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495		H3BVH4	76 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495	SPINK4	O60575	86 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495	MED14OS	P0DP75	135 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495	SEC11C	Q9BY50	192 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495	CELA1	Q9UNI1	258 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495	COL7A1	Q02388	2944 aa		11.25	□□□□□ -0.61
SH3TC1-223	ENST00000513495	STAB2	Q8WWQ8	2551 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495		A0A1W2PPQ1	181 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GAGE12B	A1L429	117 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495		A8MWL6	223 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GAGE7	O76087	117 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	ARMS2	P0C7Q2	107 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GAGE12F	P0CL80	117 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GAGE12G	P0CL81	117 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	GAGE12I	P0CL82	117 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	CT83	Q5H943	113 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	OR10G8	Q8NGN5	311 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	SFRP2	Q96HF1	295 aa		11.24	□□□□□ -0.61
SH3TC1-223	ENST00000513495	C9orf85	Q96MD7	179 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms