RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 RBMY1A1P0DJD3 496 aaKnown RBP2.45□□□□□ -2.02
NUP54-212ENST00000513248 RBMY1CP0DJD4 496 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 FGF7P21781 194 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 S100A11P31949 105 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 CAMLGP49069 296 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 DEFB1P60022 68 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 DAD1P61803 113 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 HBG1P69891 147 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 HBG2P69892 147 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 RBMY1FQ15415 496 aaKnown RBP2.45□□□□□ -2.02
NUP54-212ENST00000513248 SPINK13Q1W4C9 94 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 C10orf113Q5VZT2 155 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 LINC00305Q7Z4B0 112 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 BPIFA4PQ86YQ2 179 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 RNF182Q8N6D2 247 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 C14orf178Q8N769 122 aaPredicted RBP2.45□□□□□ -2.02
NUP54-212ENST00000513248 OR1L4Q8NGR5 311 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 OR10J6PQ8NGY7 276 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 C2orf50Q96LR7 162 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 LINC01587Q99440 93 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 PFDN5Q99471 154 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 SHANK2-AS3Q9BTD1 123 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 GGACTQ9BVM4 153 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 SLC25A31Q9H0C2 315 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 ARV1Q9H2C2 271 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 UQCC1Q9NVA1 299 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 TIMM9Q9Y5J7 89 aa2.45□□□□□ -2.02
NUP54-212ENST00000513248 DYNC2H1Q8NCM8 4307 aaKnown RBP2.45□□□□□ -2.02
NUP54-212ENST00000513248 TRAV12-2A0A075B6T6 113 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 IGKV1OR2-108A0A075B7D4 117 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 A0A0J9YX75 114 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 C7orf66A4D0T2 115 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 FAM231BA6NCW3 169 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 ZNF705GA8MUZ8 300 aaPredicted RBP2.44□□□□□ -2.02
NUP54-212ENST00000513248 ZNF705EA8MWA4 302 aaPredicted RBP2.44□□□□□ -2.02
NUP54-212ENST00000513248 E9PLD3 99 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 FNDC10F2Z333 226 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 C17orf112F2Z3M2 114 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 BOLA2-SMG1P6H3BVE0 249 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 K7EPK0 472 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 M0R2Z0 102 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 PLA2G10O15496 165 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 DEDDO75618 318 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 PET100P0DJ07 73 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 PRB4P10163 310 aaPredicted RBP2.44□□□□□ -2.02
NUP54-212ENST00000513248 TSPOP30536 169 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 BTCP35070 178 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 TCTAP57738 103 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 B2MP61769 119 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 CLINT1Q14677 625 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 PSG3Q16557 428 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 ATP6V1FQ16864 119 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 GDF5OSQ5U4N7 250 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 FAM222AQ5U5X8 452 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 MIC13Q5XKP0 118 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 LGALS9CQ6DKI2 356 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 LCN15Q6UWW0 184 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 TMEM14EPQ6UXP3 125 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 Q8NAQ8 132 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 OR8A1Q8NGG7 326 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 SCGB1C1Q8TD33 95 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 BLNKQ8WV28 456 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 RPUSD4Q96CM3 377 aaKnown RBP2.44□□□□□ -2.02
NUP54-212ENST00000513248 C16orf74Q96GX8 76 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 IGF2BP2-AS1Q96M15 143 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 SDHCQ99643 169 aaPredicted RBP2.44□□□□□ -2.02
NUP54-212ENST00000513248 SLC50A1Q9BRV3 221 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 NIPSNAP3BQ9BS92 247 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 SLC35B3Q9H1N7 401 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 YTHDF2Q9Y5A9 579 aaKnown RBP2.44□□□□□ -2.02
NUP54-212ENST00000513248 PXMP4Q9Y6I8 212 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 TENM2Q9NT68 2774 aa2.44□□□□□ -2.02
NUP54-212ENST00000513248 TRAV5A0A0B4J249 113 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 LOC100131303A0A0U1RQF7 123 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 F5H768 121 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 INMT-MINDY4F8WBC2 141 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 MPDU1O75352 247 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 UPK1BO75841 260 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 SIX6O95475 246 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 IFNA5P01569 189 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 P0DMU3 169 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 FAM231AP0DMU4 169 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 FAM231CP0DMU5 169 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 CXCL2P19875 107 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 CXCL3P19876 107 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 LEPP41159 167 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 CSN1S1P47710 185 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 SULT1A1P50225 295 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 PLP1P60201 277 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 OXA1LQ15070 435 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 GUK1Q16774 197 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 C12orf74Q32Q52 190 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 LINC00299Q6ZSB3 139 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 BAP18Q8IXM2 172 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 RPP25LQ8N5L8 163 aaKnown RBP2.43□□□□□ -2.02
NUP54-212ENST00000513248 TMEM252Q8N6L7 170 aa2.43□□□□□ -2.02
NUP54-212ENST00000513248 OR11H7Q8NGC8 314 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms