RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
VEGFA-216ENST00000512683 TDRG1Q3Y452 100 aa8.53□□□□□ -1.04
VEGFA-216ENST00000512683 OR2G3Q8NGZ4 309 aa8.53□□□□□ -1.04
VEGFA-216ENST00000512683 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
VEGFA-216ENST00000512683 MED28Q9H204 178 aa8.53□□□□□ -1.04
VEGFA-216ENST00000512683 HERC1Q15751 4861 aa8.52□□□□□ -1.04
VEGFA-216ENST00000512683 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 TRAV8-1A0A0A6YYK1 113 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 C9JCJ5 164 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 K7EQD1 137 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 CIDEAO60543 219 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 ARL14EPLP0DKL9 152 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 FAM159AQ6UWV7 190 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 GOLT1AQ6ZVE7 132 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 HSD17B11Q8NBQ5 300 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 SUN5Q8TC36 379 aa8.52□□□□□ -1.05
VEGFA-216ENST00000512683 STAG3L2P0CL84 134 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 STAG3L3P0CL85 134 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 GCSHP23434 173 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 ATP6V0CP27449 155 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 CDC34P49427 236 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-216ENST00000512683 GNG5P63218 68 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 TMEM183BQ1AE95 376 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 FAM74A1Q5RGS3 127 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 TMEM183AQ8IXX5 376 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 NTN5Q8WTR8 489 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-216ENST00000512683 RAB24Q969Q5 203 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 PSMG3Q9BT73 122 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-216ENST00000512683 RPH3ALQ9UNE2 315 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 TNFRSF18Q9Y5U5 241 aa8.51□□□□□ -1.05
VEGFA-216ENST00000512683 TRAV4A0A0B4J268 109 aa8.5□□□□□ -1.05
VEGFA-216ENST00000512683 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
VEGFA-216ENST00000512683 GNRH2O43555 120 aa8.5□□□□□ -1.05
VEGFA-216ENST00000512683 GIPP09681 153 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-216ENST00000512683 GYPEP15421 78 aa8.5□□□□□ -1.05
VEGFA-216ENST00000512683 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
VEGFA-216ENST00000512683 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
VEGFA-216ENST00000512683 FAT1Q14517 4588 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 RNF222A6NCQ9 220 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 M0R2P5 195 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 CRYGDP07320 174 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
VEGFA-216ENST00000512683 SFTA3P0C7M3 94 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 GCHFRP30047 84 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 SERF2P84101 59 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 Q5VSD8 79 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 OR4C5Q8NGB2 326 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 SGK494Q96LW2 274 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 TMEM70Q9BUB7 260 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 TREM1Q9NP99 234 aa8.49□□□□□ -1.05
VEGFA-216ENST00000512683 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 F6UZH7 168 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 C1QBP02746 253 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 ASB13Q8WXK3 278 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 KCNS1Q96KK3 526 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 NAGKQ9UJ70 344 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 TNFSF18Q9UNG2 199 aa8.48□□□□□ -1.05
VEGFA-216ENST00000512683 TRAV21A0A0B4J279 112 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 GGTLC3B5MD39 225 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 G3V3Q6 166 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 IGLV2-11P01706 119 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 MBP02144 154 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 TCRAP04437 139 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 TYMSP04818 313 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
VEGFA-216ENST00000512683 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 RPL7L1Q6DKI1 246 aaKnown RBP8.47□□□□□ -1.05
VEGFA-216ENST00000512683 WFDC10BQ8IUB3 73 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 C11orf21Q9P2W6 132 aa8.47□□□□□ -1.05
VEGFA-216ENST00000512683 TRAV8-6A0A0B4J262 113 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 PSCAO43653 123 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 PFDN1O60925 122 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 CXorf1O96002 111 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
VEGFA-216ENST00000512683 ZNF726P1Q15940 193 aa8.46□□□□□ -1.06
VEGFA-216ENST00000512683 INO80EQ8NBZ0 244 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-216ENST00000512683 FXYD6-FXYD2A0A087WZ82 144 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 TRBV6-4A0A1B0GX49 114 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 OR2T35Q8NGX2 323 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 PTH2Q96A98 100 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 ACTR3CQ9C0K3 210 aaPredicted RBP8.45□□□□□ -1.06
VEGFA-216ENST00000512683 TMEM167BQ9NRX6 74 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
VEGFA-216ENST00000512683 IGLV5-52A0A0A0MRZ9 124 aa8.44□□□□□ -1.06
VEGFA-216ENST00000512683 GATA1P15976 413 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-216ENST00000512683 FLI1Q01543 452 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-216ENST00000512683 RGS21Q2M5E4 152 aa8.44□□□□□ -1.06
VEGFA-216ENST00000512683 Q6ZNX1 250 aa8.44□□□□□ -1.06
VEGFA-216ENST00000512683 TM2D2Q9BX73 214 aa8.44□□□□□ -1.06
VEGFA-216ENST00000512683 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
VEGFA-216ENST00000512683 BORCS7-ASMTA0A0B4J1R7 106 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms