RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KCNRGQ8N5I3 272 aa9.19□□□□□ -0.94
RNF4-215ENST00000511843 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
RNF4-215ENST00000511843 ZNF479Q96JC4 524 aa9.19□□□□□ -0.94
RNF4-215ENST00000511843 NDFIP1Q9BT67 221 aa9.19□□□□□ -0.94
RNF4-215ENST00000511843 SERTM2A0A1B0GWG4 89 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 MAP1LC3B2A6NCE7 125 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 K7EQM0 130 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 GCGP01275 180 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 IFNA7P01567 189 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 TDRG1Q3Y452 100 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 C1orf134Q5TEV5 83 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 KRTAP1-5Q9BYS1 174 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 MAP1LC3BQ9GZQ8 125 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
RNF4-215ENST00000511843 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 A0A1W2PRE2 83 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 FAM74A7A6NL05 159 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 CRYBA4P53673 196 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 RASL10AQ92737 203 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 SPXQ9BT56 116 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 Q9H8V8 135 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 PRO0255Q9UI72 69 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
RNF4-215ENST00000511843 A0A1B0GV50 99 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 PEX7O00628 323 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 ZNF345Q14585 488 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 SMUG1Q53HV7 270 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 MRPS16Q9Y3D3 137 aaKnown RBP9.16□□□□□ -0.94
RNF4-215ENST00000511843 ICOSQ9Y6W8 199 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 ARL2-SNX15V9GYD0 113 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
RNF4-215ENST00000511843 PKD1P98161 4303 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 M0R2P5 195 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 BCL2L11O43521 198 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 ZFP69Q49AA0 526 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 SOHLH1Q5JUK2 328 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 Q86TA4 180 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 KCNS1Q96KK3 526 aa9.15□□□□□ -0.94
RNF4-215ENST00000511843 ZNF471Q9BX82 626 aaPredicted RBP9.15□□□□□ -0.94
RNF4-215ENST00000511843 PKHD1P08F94 4074 aa9.15□□□□□ -0.95
RNF4-215ENST00000511843 LOC100131303A0A0U1RQF7 123 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 HMSDA8MTL9 139 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 C9JCJ5 164 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 PFN1P07737 140 aaKnown RBP9.14□□□□□ -0.95
RNF4-215ENST00000511843 TNP2Q05952 138 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 OR4C5Q8NGB2 326 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 FAM213BQ8TBF2 198 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
RNF4-215ENST00000511843 TRAV4A0A0B4J268 109 aa9.13□□□□□ -0.95
RNF4-215ENST00000511843 KANTRA0A1W2PQU2 76 aa9.13□□□□□ -0.95
RNF4-215ENST00000511843 GYPEP15421 78 aa9.13□□□□□ -0.95
RNF4-215ENST00000511843 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
RNF4-215ENST00000511843 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
RNF4-215ENST00000511843 DPPA3Q6W0C5 159 aa9.13□□□□□ -0.95
RNF4-215ENST00000511843 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 A0A0D9SG52 128 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 K7EQD1 137 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 PAGE4O60829 102 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 SEC11BP0C7V7 166 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 PPT1P50897 306 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 SLAQ13239 276 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 TMUB2Q71RG4 321 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 SFT2D1Q8WV19 159 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 HERC2O95714 4834 aa9.12□□□□□ -0.95
RNF4-215ENST00000511843 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 PFDN1O60925 122 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 NXPH4O95158 308 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
RNF4-215ENST00000511843 CRIP1P50238 77 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
RNF4-215ENST00000511843 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 STOML3Q8TAV4 291 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 HIST1H2BAQ96A08 127 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 ZC2HC1AQ96GY0 325 aa9.11□□□□□ -0.95
RNF4-215ENST00000511843 FBLL1A6NHQ2 334 aaKnown RBP9.1□□□□□ -0.95
RNF4-215ENST00000511843 M0R036 132 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 ZNF506Q5JVG8 444 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 ZNF575Q86XF7 245 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
RNF4-215ENST00000511843 NKX6-2Q9C056 277 aaPredicted RBP9.1□□□□□ -0.95
RNF4-215ENST00000511843 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
RNF4-215ENST00000511843 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 UMAD1C9J7I0 102 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 SIVA1O15304 175 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 RS1O15537 224 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 SH2D1AO60880 128 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 ORM1P02763 201 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 GATA1P15976 413 aaPredicted RBP9.09□□□□□ -0.95
RNF4-215ENST00000511843 SRIP30626 198 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 UBE2G1P62253 170 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 TTC32Q5I0X7 151 aa9.09□□□□□ -0.95
RNF4-215ENST00000511843 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
RNF4-215ENST00000511843 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms