RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PRNTQ86SH4 94 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
PDLIM5-212ENST00000509333 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 KANTRA0A1W2PQU2 76 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 UMAD1C9J7I0 102 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 IFNA7P01567 189 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 CCL18P55774 89 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 FHL2Q14192 279 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 LGALSLQ3ZCW2 172 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 SAPCD1Q5SSQ6 148 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 NDFIP1Q9BT67 221 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 NAGKQ9UJ70 344 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
PDLIM5-212ENST00000509333 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 GCGP01275 180 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 ESRGQ1W209 222 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 STOML3Q8TAV4 291 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 HIST1H2BAQ96A08 127 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
PDLIM5-212ENST00000509333 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 TYMSP04818 313 aa11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 EIF5AP63241 154 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 SMUG1Q53HV7 270 aa11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 TCTE3Q8IZS6 198 aa11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 SFT2D1Q8WV19 159 aa11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
PDLIM5-212ENST00000509333 A0A096LPF7 62 aa11.18□□□□□ -0.62
PDLIM5-212ENST00000509333 PEX7O00628 323 aa11.18□□□□□ -0.62
PDLIM5-212ENST00000509333 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-212ENST00000509333 SLAQ13239 276 aa11.18□□□□□ -0.62
PDLIM5-212ENST00000509333 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
PDLIM5-212ENST00000509333 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
PDLIM5-212ENST00000509333 M0R2P5 195 aa11.17□□□□□ -0.62
PDLIM5-212ENST00000509333 RTL8CO15255 209 aa11.17□□□□□ -0.62
PDLIM5-212ENST00000509333 CRIP1P50238 77 aa11.17□□□□□ -0.62
PDLIM5-212ENST00000509333 CRYBA4P53673 196 aa11.17□□□□□ -0.62
PDLIM5-212ENST00000509333 FAM213BQ8TBF2 198 aa11.17□□□□□ -0.62
PDLIM5-212ENST00000509333 PRO0255Q9UI72 69 aa11.17□□□□□ -0.62
PDLIM5-212ENST00000509333 FABP5P3A8MUU1 101 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 PAX4O43316 350 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 PAGE4O60829 102 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 PFDN1O60925 122 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 PPT1P50897 306 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 CST9LP1Q5W188 147 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 DPPA3Q6W0C5 159 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 Q9H8V8 135 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 ARL2-SNX15V9GYD0 113 aa11.16□□□□□ -0.62
PDLIM5-212ENST00000509333 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
PDLIM5-212ENST00000509333 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
PDLIM5-212ENST00000509333 SFTA3P0C7M3 94 aa11.15□□□□□ -0.62
PDLIM5-212ENST00000509333 TPT1P13693 172 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-212ENST00000509333 LINC00336Q6ZUF6 198 aa11.15□□□□□ -0.62
PDLIM5-212ENST00000509333 ZFP30Q9Y2G7 519 aa11.15□□□□□ -0.62
PDLIM5-212ENST00000509333 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
PDLIM5-212ENST00000509333 C1QBP02746 253 aa11.14□□□□□ -0.63
PDLIM5-212ENST00000509333 CCL20P78556 96 aa11.14□□□□□ -0.63
PDLIM5-212ENST00000509333 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
PDLIM5-212ENST00000509333 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
PDLIM5-212ENST00000509333 TCEAL7Q9BRU2 100 aa11.14□□□□□ -0.63
PDLIM5-212ENST00000509333 TRAV4A0A0B4J268 109 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 NBDYA0A0U1RRE5 68 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 A0A1B0GV50 99 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 ZFP69Q49AA0 526 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 OR4C5Q8NGB2 326 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 PTH2Q96A98 100 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 UPK3BQ9BT76 320 aa11.13□□□□□ -0.63
PDLIM5-212ENST00000509333 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
PDLIM5-212ENST00000509333 ZNF876PQ49A33 203 aa11.12□□□□□ -0.63
PDLIM5-212ENST00000509333 Q86TA4 180 aa11.12□□□□□ -0.63
PDLIM5-212ENST00000509333 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
PDLIM5-212ENST00000509333 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
PDLIM5-212ENST00000509333 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 C9JCJ5 164 aa11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 RAB5CP51148 216 aa11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 C1orf134Q5TEV5 83 aa11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 ICOSQ9Y6W8 199 aa11.11□□□□□ -0.63
PDLIM5-212ENST00000509333 A0A1B0GVY2 172 aa11.1□□□□□ -0.63
PDLIM5-212ENST00000509333 PRSS29PA6NIE9 313 aa11.1□□□□□ -0.63
PDLIM5-212ENST00000509333 RS1O15537 224 aa11.1□□□□□ -0.63
PDLIM5-212ENST00000509333 LTAP01374 205 aa11.1□□□□□ -0.63
PDLIM5-212ENST00000509333 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
PDLIM5-212ENST00000509333 EIF5AL1Q6IS14 154 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-212ENST00000509333 PKD1P98161 4303 aa11.09□□□□□ -0.63
PDLIM5-212ENST00000509333 KRBOX1C9JBD0 128 aa11.09□□□□□ -0.63
PDLIM5-212ENST00000509333 ORM1P02763 201 aa11.09□□□□□ -0.63
PDLIM5-212ENST00000509333 S100A9P06702 114 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-212ENST00000509333 SULT1A2P50226 295 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms