RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PAM16Q9Y3D7 125 aa12.97□□□□□ -0.33
TRAPPC11-204ENST00000505676 MUC21A0A0G2JKD1 596 aa12.96□□□□□ -0.33
TRAPPC11-204ENST00000505676 MUC21A0A140T8X8 626 aa12.96□□□□□ -0.33
TRAPPC11-204ENST00000505676 IFI27P40305 119 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC11-204ENST00000505676 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
TRAPPC11-204ENST00000505676 MUC21Q5SSG8 566 aa12.96□□□□□ -0.33
TRAPPC11-204ENST00000505676 MSRB1Q9NZV6 116 aa12.96□□□□□ -0.33
TRAPPC11-204ENST00000505676 TRAV9-2A0A087WT02 112 aa12.96□□□□□ -0.34
TRAPPC11-204ENST00000505676 PSMG4Q5JS54 123 aa12.96□□□□□ -0.34
TRAPPC11-204ENST00000505676 Q6ZSV7 163 aa12.96□□□□□ -0.34
TRAPPC11-204ENST00000505676 F6UB75 175 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 H3BVH4 76 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 NPYP01303 97 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 SRD5A1P18405 259 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 SSTP61278 116 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 WFDC3Q8IUB2 231 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 OR1N2Q8NGR9 330 aa12.95□□□□□ -0.34
TRAPPC11-204ENST00000505676 HBDP02042 147 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 SPATA45Q537H7 98 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 PHLDA3Q9Y5J5 127 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 UTP20O75691 2785 aaKnown RBP12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 C7orf71A4D174 169 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 NXPH4O95158 308 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 TNFRSF6BO95407 300 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 PPP1R17O96001 155 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 ZNF688P0C7X2 276 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 EDN2P20800 178 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 TDRG1Q3Y452 100 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 OR9G4Q8NGQ1 327 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
TRAPPC11-204ENST00000505676 ZNF705AQ6ZN79 300 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 C16orf95Q9H693 158 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 UQCR10Q9UDW1 63 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 RNASE1P07998 156 aaKnown RBP12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 OR11H1Q8NG94 326 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 OR2K2Q8NGT1 345 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 DUX5Q96PT3 197 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 DPH3P1Q9H4G8 78 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
TRAPPC11-204ENST00000505676 LOC389332A0A1B0GUA5 103 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 AP1S3Q96PC3 154 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 M0R381 172 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 EVI2AP22794 236 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 CDKN1BP46527 198 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 Q8N8P6 123 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 POLQO75417 2590 aa12.92□□□□□ -0.34
TRAPPC11-204ENST00000505676 OR4C46A6NHA9 309 aa12.91□□□□□ -0.34
TRAPPC11-204ENST00000505676 J3KRW8 73 aa12.91□□□□□ -0.34
TRAPPC11-204ENST00000505676 K7EMI3 77 aa12.91□□□□□ -0.34
TRAPPC11-204ENST00000505676 SLURP1P55000 103 aa12.91□□□□□ -0.34
TRAPPC11-204ENST00000505676 LINC01545Q5VT33 79 aa12.91□□□□□ -0.34
TRAPPC11-204ENST00000505676 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
TRAPPC11-204ENST00000505676 HSBP1L1C9JCN9 74 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 NCR2O95944 276 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 TFPI2P48307 235 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 HIST2H2BCQ6DN03 193 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 ST20Q9HBF5 79 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 TRAV25A0A0B4J276 109 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 A8MTW9 85 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 SMKR1H3BMG3 65 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 DEFB1P60022 68 aa12.9□□□□□ -0.34
TRAPPC11-204ENST00000505676 KHDC1LQ5JSQ8 128 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 CRYBG3Q68DQ2 2970 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 ZNF418Q8TF45 676 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 KMT2BQ9UMN6 2715 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 M0R143 59 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 IGLC3P0DOY3 106 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 FCER1GP30273 86 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 ADAMTSL5Q6ZMM2 481 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 POM121L12Q8N7R1 296 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
TRAPPC11-204ENST00000505676 A0A096LNJ9 63 aa12.88□□□□□ -0.35
TRAPPC11-204ENST00000505676 Q6ZQT7 251 aa12.88□□□□□ -0.35
TRAPPC11-204ENST00000505676 NRACQ8N912 160 aa12.88□□□□□ -0.35
TRAPPC11-204ENST00000505676 LGALS9BQ3B8N2 356 aa12.88□□□□□ -0.35
TRAPPC11-204ENST00000505676 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
TRAPPC11-204ENST00000505676 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
TRAPPC11-204ENST00000505676 FHL3Q13643 280 aa12.87□□□□□ -0.35
TRAPPC11-204ENST00000505676 LINC00173Q6ZV60 143 aa12.87□□□□□ -0.35
TRAPPC11-204ENST00000505676 DOPEY2Q9Y3R5 2298 aa12.87□□□□□ -0.35
TRAPPC11-204ENST00000505676 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
TRAPPC11-204ENST00000505676 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
TRAPPC11-204ENST00000505676 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 ESM1Q9NQ30 184 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 CELSR2Q9HCU4 2923 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 CSMD1Q96PZ7 3565 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 IGLV2-18A0A075B6J9 118 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 TRGV11A0A075B6L2 103 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 HLA-DRB4P13762 266 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 C18orf65Q6ZTR6 163 aa12.86□□□□□ -0.35
TRAPPC11-204ENST00000505676 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms