RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 RPL39LQ96EH5 51 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 TRBV7-3A0A075B6L6 115 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 CRLF1O75462 422 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 CRYGCP07315 174 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 IFITM1P13164 125 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 DEFB109BQ30KR1 87 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 PRSS33Q8NF86 280 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 TMEM14CQ9P0S9 112 aa8.26□□□□□ -1.09
TRAPPC12-223ENST00000497597 TIMM23O14925 209 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 CRIP2P52943 208 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 TAL2Q16559 108 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 LRBAP50851 2863 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 ANKHD1Q8IWZ3 2542 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 TRAV8-4A0A0B4J246 113 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 ID1P41134 155 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 U3KQK5 164 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 MAP1AP78559 2803 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 IGHV1-3A0A0C4DH29 117 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 OVOL3O00110 214 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 IGHV1-8P0DP01 117 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 NDUFV3P56181 108 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 ZNF56Q15929 161 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 ZNF474Q6S9Z5 364 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 C22orf34Q6ZV56 151 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 C21orf62Q9NYP8 219 aa8.25□□□□□ -1.09
TRAPPC12-223ENST00000497597 K7EIM0 57 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 LGALS3P17931 250 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 DEFB1P60022 68 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 FAM74A4Q5TZK3 123 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 PHLDA3Q9Y5J5 127 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 I3L2K1 104 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 MRPL23Q16540 153 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 TMEM95Q3KNT9 176 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 PSMG4Q5JS54 123 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 PVRIGQ6DKI7 326 aa8.24□□□□□ -1.09
TRAPPC12-223ENST00000497597 TRAV12-3A0A0B4J271 114 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 K7EM74 188 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 IGLV1-44P01699 117 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 NDPQ00604 133 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 ZNF256Q9Y2P7 627 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 SPRY4Q9C004 299 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 TEX22C9J3V5 150 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 BRI3O95415 125 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 ADIPOQQ15848 244 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 Q6ZS46 218 aa8.23□□□□□ -1.09
TRAPPC12-223ENST00000497597 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 C1orf162Q8NEQ5 155 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 A0A1W2PNU3 283 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 C17orf100A8MU93 164 aa8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 DUSP14O95147 198 aaKnown RBP8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 LYPD1Q8N2G4 141 aa8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 SMIM2Q9BVW6 85 aa8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 LOXP28300 417 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 TEX36Q5VZQ5 186 aa8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 PRO1854Q9UHT4 67 aa8.22□□□□□ -1.09
TRAPPC12-223ENST00000497597 TRAV17A0A0B4J275 112 aa8.21□□□□□ -1.09
TRAPPC12-223ENST00000497597 A0A0U1RRA0 63 aa8.21□□□□□ -1.09
TRAPPC12-223ENST00000497597 SHISA9B4DS77 424 aa8.21□□□□□ -1.09
TRAPPC12-223ENST00000497597 LY6HO94772 140 aa8.21□□□□□ -1.09
TRAPPC12-223ENST00000497597 IGLC6P0CF74 106 aa8.21□□□□□ -1.09
TRAPPC12-223ENST00000497597 NDUFA11Q86Y39 141 aa8.21□□□□□ -1.09
TRAPPC12-223ENST00000497597 TLN1Q9Y490 2541 aaKnown RBP8.21□□□□□ -1.1
TRAPPC12-223ENST00000497597 A4D1N5 150 aa8.21□□□□□ -1.1
TRAPPC12-223ENST00000497597 RS1O15537 224 aa8.21□□□□□ -1.1
TRAPPC12-223ENST00000497597 SUMO2P61956 95 aaKnown RBP8.21□□□□□ -1.1
TRAPPC12-223ENST00000497597 CHCHD5Q9BSY4 110 aa8.21□□□□□ -1.1
TRAPPC12-223ENST00000497597 ZMAT4Q9H898 229 aa8.21□□□□□ -1.1
TRAPPC12-223ENST00000497597 C11orf86A6NJI1 115 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 C16orf92Q96LL3 132 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 IGKV3D-20A0A0C4DH25 116 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 VSTM5A8MXK1 200 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 TIMD4Q96H15 378 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 C11orf21Q9P2W6 132 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 PAX8Q06710 450 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 ORMDL2Q53FV1 153 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 AGPAT4-IT1Q9H0P7 198 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 TP53TG1Q9Y2A0 90 aa8.2□□□□□ -1.1
TRAPPC12-223ENST00000497597 IGLV3-9A0A075B6K5 115 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 Q8N1Y9 231 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 ATP6V0E2Q8NHE4 81 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 RAB1BQ9H0U4 201 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 BDP1A6H8Y1 2624 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 BSPH1Q075Z2 132 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 FOXC1Q12948 553 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 TMEM30BQ3MIR4 351 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 CLEC19AQ6UXS0 136 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 C10orf126Q8N4M7 172 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 LINC00527Q9UJ94 153 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 A0A087WWL8 130 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 TMEM178BH3BS89 294 aa8.19□□□□□ -1.1
TRAPPC12-223ENST00000497597 VCX2Q9H322 139 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms