RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 BTF3P20290 206 aaKnown RBP9.76□□□□□ -0.85
VTI1A-209ENST00000496445 ATP6V0CP27449 155 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 SLAQ13239 276 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 Q6ZRN7 208 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-209ENST00000496445 SPATA12Q7Z6I5 190 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 SUN5Q8TC36 379 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 SGK494Q96LW2 274 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 SPXQ9BT56 116 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 MED28Q9H204 178 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 SH3BGRL3Q9H299 93 aa9.76□□□□□ -0.85
VTI1A-209ENST00000496445 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 LYPD5Q6UWN5 251 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 IQCF2Q8IXL9 164 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 RAB24Q969Q5 203 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 TREM1Q9NP99 234 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
VTI1A-209ENST00000496445 FAT1Q14517 4588 aa9.74□□□□□ -0.85
VTI1A-209ENST00000496445 TRAV4A0A0B4J268 109 aa9.74□□□□□ -0.85
VTI1A-209ENST00000496445 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
VTI1A-209ENST00000496445 CDK2AP2O75956 126 aa9.74□□□□□ -0.85
VTI1A-209ENST00000496445 GCHFRP30047 84 aa9.74□□□□□ -0.85
VTI1A-209ENST00000496445 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
VTI1A-209ENST00000496445 RNF222A6NCQ9 220 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 M0R2P5 195 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 IGLV2-11P01706 119 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 TCRAP04437 139 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 GIPP09681 153 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-209ENST00000496445 GYPEP15421 78 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 ZNF80P51504 273 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-209ENST00000496445 NEGR1Q7Z3B1 354 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 C5orf17Q8NAS9 161 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 SDF2L1Q9HCN8 221 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 C11orf21Q9P2W6 132 aa9.73□□□□□ -0.85
VTI1A-209ENST00000496445 SERTM2A0A1B0GWG4 89 aa9.72□□□□□ -0.85
VTI1A-209ENST00000496445 MBP02144 154 aa9.72□□□□□ -0.85
VTI1A-209ENST00000496445 SRIP30626 198 aa9.72□□□□□ -0.85
VTI1A-209ENST00000496445 SERF2P84101 59 aa9.72□□□□□ -0.85
VTI1A-209ENST00000496445 RPL7L1Q6DKI1 246 aaKnown RBP9.72□□□□□ -0.85
VTI1A-209ENST00000496445 WFDC10BQ8IUB3 73 aa9.72□□□□□ -0.85
VTI1A-209ENST00000496445 VPS13BQ7Z7G8 4022 aa9.71□□□□□ -0.85
VTI1A-209ENST00000496445 LOC100131303A0A0U1RQF7 123 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 ZNF726P1Q15940 193 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 ASB13Q8WXK3 278 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 TNFSF18Q9UNG2 199 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 PSG8Q9UQ74 426 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 TNFRSF18Q9Y5U5 241 aa9.71□□□□□ -0.86
VTI1A-209ENST00000496445 FXYD6-FXYD2A0A087WZ82 144 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 G3V3Q6 166 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 CXorf1O96002 111 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 GCGP01275 180 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 ORM1P02763 201 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 PCNPQ8WW12 178 aaKnown RBP9.7□□□□□ -0.86
VTI1A-209ENST00000496445 KCNS1Q96KK3 526 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 NDFIP1Q9BT67 221 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-209ENST00000496445 TMEM167BQ9NRX6 74 aa9.7□□□□□ -0.86
VTI1A-209ENST00000496445 C9JCJ5 164 aa9.69□□□□□ -0.86
VTI1A-209ENST00000496445 GATA1P15976 413 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-209ENST00000496445 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
VTI1A-209ENST00000496445 FLI1Q01543 452 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-209ENST00000496445 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
VTI1A-209ENST00000496445 DPPA3Q6W0C5 159 aa9.69□□□□□ -0.86
VTI1A-209ENST00000496445 CYB561D1Q8N8Q1 229 aa9.69□□□□□ -0.86
VTI1A-209ENST00000496445 EPDR1Q9UM22 224 aa9.69□□□□□ -0.86
VTI1A-209ENST00000496445 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
VTI1A-209ENST00000496445 PRNTQ86SH4 94 aa9.68□□□□□ -0.86
VTI1A-209ENST00000496445 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
VTI1A-209ENST00000496445 INO80EQ8NBZ0 244 aaPredicted RBP9.68□□□□□ -0.86
VTI1A-209ENST00000496445 OR2T35Q8NGX2 323 aa9.68□□□□□ -0.86
VTI1A-209ENST00000496445 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
VTI1A-209ENST00000496445 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
VTI1A-209ENST00000496445 K7EQM0 130 aa9.67□□□□□ -0.86
VTI1A-209ENST00000496445 RS1O15537 224 aa9.67□□□□□ -0.86
VTI1A-209ENST00000496445 DNAH10OSP0CZ25 163 aa9.67□□□□□ -0.86
VTI1A-209ENST00000496445 FUSP35637 526 aaKnown RBP eCLIP9.67□□□□□ -0.86
VTI1A-209ENST00000496445 CFAP126Q5VTH2 177 aa9.67□□□□□ -0.86
VTI1A-209ENST00000496445 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
VTI1A-209ENST00000496445 TXNDC17Q9BRA2 123 aa9.67□□□□□ -0.86
VTI1A-209ENST00000496445 CTXND1A0A1B0GTU2 59 aa9.66□□□□□ -0.86
VTI1A-209ENST00000496445 A0A1W2PRE2 83 aa9.66□□□□□ -0.86
VTI1A-209ENST00000496445 FBLL1A6NHQ2 334 aaKnown RBP9.66□□□□□ -0.86
VTI1A-209ENST00000496445 TAAR5O14804 337 aa9.66□□□□□ -0.86
VTI1A-209ENST00000496445 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
VTI1A-209ENST00000496445 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
VTI1A-209ENST00000496445 ZFP69Q49AA0 526 aa9.66□□□□□ -0.86
VTI1A-209ENST00000496445 SMUG1Q53HV7 270 aa9.66□□□□□ -0.86
VTI1A-209ENST00000496445 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 TRAV34A0A0B4J273 112 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 PGPEP1LA6NFU8 196 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 FGF8P55075 233 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-209ENST00000496445 ERVFC1-1P60608 527 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
VTI1A-209ENST00000496445 ARL2-SNX15V9GYD0 113 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms