RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 OCC1Q8TAD7 63 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 MRAPQ8TCY5 172 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 SGK494Q96LW2 274 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 VGLL1Q99990 258 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 SMIM7Q9BQ49 75 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 AGPAT4-IT1Q9H0P7 198 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 RPH3ALQ9UNE2 315 aa5.02□□□□□ -1.61
TPR-208ENST00000492973 STAB2Q8WWQ8 2551 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 IGKV2-40A0A087WW87 121 aaPredicted RBP5.01□□□□□ -1.61
TPR-208ENST00000492973 TRAV8-1A0A0A6YYK1 113 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 SERTM2A0A1B0GWG4 89 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 RBAKDNA6NC62 111 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 PGPEP1LA6NFU8 196 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 A8MZ25 164 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 C9JCJ5 164 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 IGKV2D-40P01614 121 aaPredicted RBP5.01□□□□□ -1.61
TPR-208ENST00000492973 ZNF688P0C7X2 276 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 DEFB131AP59861 70 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 DEFB1P60022 68 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 RPL23P62829 140 aaKnown RBP5.01□□□□□ -1.61
TPR-208ENST00000492973 FLI1Q01543 452 aaPredicted RBP5.01□□□□□ -1.61
TPR-208ENST00000492973 ERCC8Q13216 396 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 DEFB121Q5J5C9 76 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 LINC00322Q6ZN03 302 aaPredicted RBP5.01□□□□□ -1.61
TPR-208ENST00000492973 BAGE2Q86Y30 109 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 APRG1Q8IVJ8 170 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 TMEM75Q8N9X5 138 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 TVP23CQ96ET8 276 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 IGF2BP2-AS1Q96M15 143 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 SRD5A3Q9H8P0 318 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 NAT8Q9UHE5 227 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 PSG8Q9UQ74 426 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
TPR-208ENST00000492973 RBMY1BA6NDE4 496 aaKnown RBP5□□□□□ -1.61
TPR-208ENST00000492973 RBMY1EA6NEQ0 496 aaKnown RBP5□□□□□ -1.61
TPR-208ENST00000492973 KNCNA6PVL3 124 aa5□□□□□ -1.61
TPR-208ENST00000492973 F6UB75 175 aa5□□□□□ -1.61
TPR-208ENST00000492973 K7EQM0 130 aa5□□□□□ -1.61
TPR-208ENST00000492973 LTAP01374 205 aa5□□□□□ -1.61
TPR-208ENST00000492973 RBMY1DP0C7P1 496 aaKnown RBP5□□□□□ -1.61
TPR-208ENST00000492973 FRMD6-AS1P0C7T7 363 aa5□□□□□ -1.61
TPR-208ENST00000492973 ZNF705DP0CH99 300 aaPredicted RBP5□□□□□ -1.61
TPR-208ENST00000492973 ZNF705BP0CI00 300 aaPredicted RBP5□□□□□ -1.61
TPR-208ENST00000492973 CMC4P56277 68 aaPredicted RBP5□□□□□ -1.61
TPR-208ENST00000492973 UBE2G1P62253 170 aa5□□□□□ -1.61
TPR-208ENST00000492973 SNRPD3P62318 126 aaKnown RBP5□□□□□ -1.61
TPR-208ENST00000492973 PSMG4Q5JS54 123 aa5□□□□□ -1.61
TPR-208ENST00000492973 ATRAIDQ6UW56 229 aa5□□□□□ -1.61
TPR-208ENST00000492973 PRNTQ86SH4 94 aa5□□□□□ -1.61
TPR-208ENST00000492973 ZNF738Q8NE65 137 aa5□□□□□ -1.61
TPR-208ENST00000492973 OR8A1Q8NGG7 326 aa5□□□□□ -1.61
TPR-208ENST00000492973 FMC1Q96HJ9 113 aa5□□□□□ -1.61
TPR-208ENST00000492973 LINC00477Q96M19 166 aa5□□□□□ -1.61
TPR-208ENST00000492973 ASCL2Q99929 193 aa5□□□□□ -1.61
TPR-208ENST00000492973 NIPSNAP3BQ9BS92 247 aa5□□□□□ -1.61
TPR-208ENST00000492973 ZFP30Q9Y2G7 519 aa5□□□□□ -1.61
TPR-208ENST00000492973 TENM3Q9P273 2699 aa5□□□□□ -1.61
TPR-208ENST00000492973 A0A0J9YX75 114 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 FBLL1A6NHQ2 334 aaKnown RBP4.99□□□□□ -1.61
TPR-208ENST00000492973 J3KRW8 73 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 K7EN84 100 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 VCYO14598 125 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 SNAPINO95295 136 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 GCGP01275 180 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 CT45A10P0DMU9 189 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 GNG4P50150 75 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 OR5I1Q13606 314 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 CENPWQ5EE01 88 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 SAPCD1Q5SSQ6 148 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 GDF5OSQ5U4N7 250 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 COX8CQ7Z4L0 72 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 LINC01551Q86U37 167 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 TMEM183AQ8IXX5 376 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 SVBPQ8N300 66 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 FAM19A4Q96LR4 140 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 TUBA4BQ9H853 241 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 ZNF492Q9P255 531 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 COL7A1Q02388 2944 aa4.99□□□□□ -1.61
TPR-208ENST00000492973 C7orf77A4D0Y5 90 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 B4DEV8 164 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 M0R036 132 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 CRIP1P50238 77 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 ZNF138P52744 262 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 HIST1H1AQ02539 215 aaPredicted RBP4.98□□□□□ -1.61
TPR-208ENST00000492973 PNRC1Q12796 327 aaPredicted RBP4.98□□□□□ -1.61
TPR-208ENST00000492973 ADIRFQ15847 76 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 ACTL10Q5JWF8 245 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 TMEM78Q5T7P6 136 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 FOXI2Q6ZQN5 318 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 Q86TA4 180 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 SBSPONQ8IVN8 264 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 NHLRC2Q8NBF2 726 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 OR10J6PQ8NGY7 276 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 ISOC2Q96AB3 205 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 SMIM12Q96EX1 92 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 B9D2Q9BPU9 175 aa4.98□□□□□ -1.61
TPR-208ENST00000492973 SAV1Q9H4B6 383 aaPredicted RBP4.98□□□□□ -1.61
TPR-208ENST00000492973 LOC102724200A0A096LPH7 203 aaPredicted RBP4.97□□□□□ -1.61
TPR-208ENST00000492973 A8MTW9 85 aa4.97□□□□□ -1.61
TPR-208ENST00000492973 H3BMM0 161 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms