RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	PAXX	Q9BUH6	204 aa		12.51	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	IGKV2D-24	A0A075B6R9	120 aa		12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	C5orf51	A6NDU8	294 aa		12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	SEC11B	P0C7V7	166 aa		12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	SMIM18	P0DKX4	95 aa		12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	CFAP126	Q5VTH2	177 aa		12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	SLIRP	Q9GZT3	109 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	SDF2L1	Q9HCN8	221 aa		12.5	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	IGHV3-73	A0A0B4J1V6	119 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	FAM24A	A6NFZ4	105 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	NDUFB6	O95139	128 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	MGST1	P10620	155 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	FGF7	P21781	194 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	RAN	P62826	216 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	GCSAML	Q5JQS6	135 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	KCNS1	Q96KK3	526 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	FLVCR2	Q9UPI3	526 aa		12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	LSM5	Q9Y4Y9	91 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334		A0A087WWC5	75 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	TRAV21	A0A0B4J279	112 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	TYMS	P04818	313 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	ASIP	P42127	132 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	C14orf177	Q52M58	125 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	MIR17HG	Q75NE6	70 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	TMED6	Q8WW62	240 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	FXYD5	Q96DB9	178 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	PHYHIPL	Q96FC7	376 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	C2orf50	Q96LR7	162 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	RPH3AL	Q9UNE2	315 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	URGCP-MRPS24	S4R325	110 aa		12.48	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	SULT1A1	P50225	295 aa		12.47	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	HBG1	P69891	147 aa		12.47	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	HBG2	P69892	147 aa		12.47	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	ATP6V1F	Q16864	119 aa		12.47	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	DIRC3	C9JPN6	131 aa		12.46	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	PVALB	P20472	110 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	INPP1	P49441	399 aa		12.46	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	MITD1	Q8WV92	249 aa		12.46	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	BCL7B	Q9BQE9	202 aa		12.46	□□□□□ -0.41
CDK5RAP2-218	ENST00000491334	NAP1L6	A6NFF2	107 aa		12.45	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	TMBIM6	P55061	237 aa		12.45	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	DPPA3	Q6W0C5	159 aa		12.45	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	ASB13	Q8WXK3	278 aa		12.45	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	STX12	Q86Y82	276 aa		12.44	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	CYB561D1	Q8N8Q1	229 aa		12.44	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	NPCDR1	Q9BY65	106 aa		12.44	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	KLK12	Q9UKR0	248 aa		12.44	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334		V9GYH0	126 aa		12.44	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	GAGE12J	A6NER3	117 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	GAGE1	Q13065	139 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	GAGE4	Q13068	117 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	GAGE5	Q13069	117 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	GAGE13	Q4V321	117 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	SPANXN2	Q5MJ10	180 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	FFAR4	Q5NUL3	377 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	TMEM252	Q8N6L7	170 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	OR10G9	Q8NGN4	311 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	DNAJC30	Q96LL9	226 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	MRPS26	Q9BYN8	205 aa	Known RBP	12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	C11orf1	Q9H5F2	150 aa		12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	LYRM2	Q9NU23	88 aa	Predicted RBP	12.43	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334		A0A0D9SG52	128 aa		12.42	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	FAM25E	A8MYX2	175 aa		12.42	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	OR7C2	O60412	319 aa		12.42	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	ELOB	Q15370	118 aa		12.42	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	UBE2W	Q96B02	151 aa		12.42	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	CCS	O14618	274 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	NIT1	Q86X76	327 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	HSD17B11	Q8NBQ5	300 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	PTH2	Q96A98	100 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	HYLS1	Q96M11	299 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	NMES1	Q9C002	83 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	DPH3P1	Q9H4G8	78 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	TREM1	Q9NP99	234 aa		12.41	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	IGSF23	A1L1A6	192 aa		12.4	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	FGF8	P55075	233 aa	Predicted RBP	12.4	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334		Q0VG73	95 aa		12.4	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	CMTM2	Q8TAZ6	248 aa		12.4	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	TNXB	P22105	4242 aa		12.4	□□□□□ -0.42
CDK5RAP2-218	ENST00000491334	PGPEP1L	A6NFU8	196 aa		12.39	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	LINC00694	P0DN24	101 aa		12.39	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	S100A5	P33763	92 aa		12.39	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	ZNF506	Q5JVG8	444 aa		12.39	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	KCNIP4	Q6PIL6	250 aa		12.39	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	ATRAID	Q6UW56	229 aa		12.39	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334		A0A087WX48	190 aa		12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334		F6UZH7	168 aa		12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	NOL3	O60936	208 aa	Known RBP	12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	UBE2L3	P68036	154 aa	Known RBP	12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	FAM74A1	Q5RGS3	127 aa		12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	DGAT2L7P	Q6IED9	249 aa		12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	ZFP2	Q6ZN57	461 aa		12.38	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	PGP	A6NDG6	321 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	CNPY1	Q3B7I2	92 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	OR2T35	Q8NGX2	323 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	THAP6	Q8TBB0	222 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	TVP23C	Q96ET8	276 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	C9orf85	Q96MD7	179 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	CHCHD7	Q9BUK0	85 aa		12.37	□□□□□ -0.43
CDK5RAP2-218	ENST00000491334	KCNIP2	Q9NS61	270 aa		12.37	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 66 ms