RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ANXA2RQ3ZCQ2 193 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 NUDT10Q8NFP7 164 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 NUDT11Q96G61 164 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 OVOL2Q9BRP0 275 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 OSTCQ9NRP0 149 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 X6R8D5 127 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
MCF2L-230ENST00000491028 TRGV11A0A075B6L2 103 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 IGKV3D-20A0A0C4DH25 116 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 B4DEV8 164 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 CXCL1P09341 107 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 RRN3P1Q2M238 152 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 C15orf54Q8N8G6 183 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 OR11H2Q8NH07 326 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 SFRP2Q96HF1 295 aa13.48□□□□□ -0.25
MCF2L-230ENST00000491028 RNASE7Q9H1E1 156 aaKnown RBP13.48□□□□□ -0.25
MCF2L-230ENST00000491028 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
MCF2L-230ENST00000491028 CBY3A6NI87 242 aa13.47□□□□□ -0.25
MCF2L-230ENST00000491028 M0R036 132 aa13.47□□□□□ -0.25
MCF2L-230ENST00000491028 MIFP14174 115 aa13.47□□□□□ -0.25
MCF2L-230ENST00000491028 RPS20P60866 119 aaKnown RBP13.47□□□□□ -0.25
MCF2L-230ENST00000491028 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
MCF2L-230ENST00000491028 ZMAT4Q9H898 229 aa13.47□□□□□ -0.25
MCF2L-230ENST00000491028 RETNQ9HD89 108 aa13.47□□□□□ -0.25
MCF2L-230ENST00000491028 ZNF705GA8MUZ8 300 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-230ENST00000491028 GATCO43716 136 aaKnown RBP13.46□□□□□ -0.25
MCF2L-230ENST00000491028 TYMSP04818 313 aa13.46□□□□□ -0.25
MCF2L-230ENST00000491028 HTN1P15515 57 aa13.46□□□□□ -0.25
MCF2L-230ENST00000491028 CT83Q5H943 113 aa13.46□□□□□ -0.25
MCF2L-230ENST00000491028 ZNF493Q6ZR52 646 aa13.46□□□□□ -0.25
MCF2L-230ENST00000491028 OR2D3Q8NGH3 330 aa13.46□□□□□ -0.25
MCF2L-230ENST00000491028 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
MCF2L-230ENST00000491028 C16orf74Q96GX8 76 aa13.46□□□□□ -0.25
MCF2L-230ENST00000491028 XKRY2A2RUG3 117 aa13.45□□□□□ -0.26
MCF2L-230ENST00000491028 APOC3P02656 99 aa13.45□□□□□ -0.26
MCF2L-230ENST00000491028 DNLZQ5SXM8 178 aa13.45□□□□□ -0.26
MCF2L-230ENST00000491028 OR10G8Q8NGN5 311 aa13.45□□□□□ -0.26
MCF2L-230ENST00000491028 RNASE8Q8TDE3 154 aaKnown RBP13.45□□□□□ -0.26
MCF2L-230ENST00000491028 PPP1R2P9O14990 202 aa13.44□□□□□ -0.26
MCF2L-230ENST00000491028 NHLRC4P0CG21 123 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-230ENST00000491028 ASIPP42127 132 aa13.44□□□□□ -0.26
MCF2L-230ENST00000491028 RPL19P84098 196 aaKnown RBP13.44□□□□□ -0.26
MCF2L-230ENST00000491028 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
MCF2L-230ENST00000491028 SVBPQ8N300 66 aa13.44□□□□□ -0.26
MCF2L-230ENST00000491028 TMSB15BA0A087X1C1 80 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 GNRH2O43555 120 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 AZU1P20160 251 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 Q8NAQ8 132 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 TP53TG3Q9ULZ0 132 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 V9GYV3 84 aa13.43□□□□□ -0.26
MCF2L-230ENST00000491028 IGHV3-16A0A0C4DH30 117 aa13.42□□□□□ -0.26
MCF2L-230ENST00000491028 IGHV4-28A0A0C4DH34 117 aa13.42□□□□□ -0.26
MCF2L-230ENST00000491028 A8MWL6 223 aa13.42□□□□□ -0.26
MCF2L-230ENST00000491028 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
MCF2L-230ENST00000491028 RHEBQ15382 184 aa13.42□□□□□ -0.26
MCF2L-230ENST00000491028 C11orf72Q8NBR9 251 aa13.42□□□□□ -0.26
MCF2L-230ENST00000491028 CLRN3Q8NCR9 226 aa13.42□□□□□ -0.26
MCF2L-230ENST00000491028 GRIFINA4D1Z8 144 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 SNAPINO95295 136 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 PRM2P04554 102 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 MED14OSP0DP75 135 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 TCL1AP56279 114 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 RNF212Q495C1 297 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 ZNF575Q86XF7 245 aa13.41□□□□□ -0.26
MCF2L-230ENST00000491028 SNURFLB1AK76 121 aa13.4□□□□□ -0.26
MCF2L-230ENST00000491028 IL17DQ8TAD2 202 aa13.4□□□□□ -0.26
MCF2L-230ENST00000491028 CTDSP1Q9GZU7 261 aa13.4□□□□□ -0.26
MCF2L-230ENST00000491028 GFRA4Q9GZZ7 299 aa13.4□□□□□ -0.26
MCF2L-230ENST00000491028 C11orf68Q9H3H3 251 aaKnown RBP13.4□□□□□ -0.26
MCF2L-230ENST00000491028 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
MCF2L-230ENST00000491028 MDFICQ9P1T7 246 aa13.4□□□□□ -0.26
MCF2L-230ENST00000491028 PLAC8L1A1L4L8 177 aa13.39□□□□□ -0.27
MCF2L-230ENST00000491028 FAM231BA6NCW3 169 aa13.39□□□□□ -0.27
MCF2L-230ENST00000491028 RNASE3P12724 160 aaKnown RBP13.39□□□□□ -0.27
MCF2L-230ENST00000491028 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
MCF2L-230ENST00000491028 C9orf85Q96MD7 179 aa13.39□□□□□ -0.27
MCF2L-230ENST00000491028 SPXQ9BT56 116 aa13.39□□□□□ -0.27
MCF2L-230ENST00000491028 A0A087WWC5 75 aa13.38□□□□□ -0.27
MCF2L-230ENST00000491028 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
MCF2L-230ENST00000491028 H3BVH4 76 aa13.38□□□□□ -0.27
MCF2L-230ENST00000491028 IGLC6P0CF74 106 aa13.38□□□□□ -0.27
MCF2L-230ENST00000491028 GZMBP10144 247 aa13.38□□□□□ -0.27
MCF2L-230ENST00000491028 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
MCF2L-230ENST00000491028 GSN-AS1Q9NRJ2 163 aa13.38□□□□□ -0.27
MCF2L-230ENST00000491028 TIMM8BQ9Y5J9 83 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-230ENST00000491028 NBEAL2Q6ZNJ1 2754 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 C7orf77A4D0Y5 90 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 SNAI2O43623 268 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 OR5AL1P0C617 328 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 ARMS2P0C7Q2 107 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 FER1L6-AS1Q8NA97 138 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 SSBP4Q9BWG4 385 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-230ENST00000491028 SCRT2Q9NQ03 307 aa13.37□□□□□ -0.27
MCF2L-230ENST00000491028 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
MCF2L-230ENST00000491028 FOXA3P55318 350 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-230ENST00000491028 TMEM242Q9NWH2 141 aa13.36□□□□□ -0.27
MCF2L-230ENST00000491028 SMIM27A0A1W2PRY6 76 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 LYRM9A8MSI8 78 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms