RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TMEM35BQ8NCS4 154 aa0.19□□□□□ -2.38
CD46-216ENST00000490278 ATG5Q9H1Y0 275 aa0.19□□□□□ -2.38
CD46-216ENST00000490278 PNMA8CA0A1B0GUJ8 204 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 SLC25A5P05141 298 aaKnown RBP0.18□□□□□ -2.38
CD46-216ENST00000490278 S100GP29377 79 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 KLKP1Q107X0 134 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 IQCJQ1A5X6 159 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 DDA1Q9BW61 102 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 NINQ8N4C6 2090 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 MED23Q9ULK4 1368 aa0.18□□□□□ -2.38
CD46-216ENST00000490278 CDK12Q9NYV4 1490 aaPredicted RBP0.17□□□□□ -2.38
CD46-216ENST00000490278 ADCYAP1P18509 176 aa0.17□□□□□ -2.38
CD46-216ENST00000490278 PCBD1P61457 104 aa0.17□□□□□ -2.38
CD46-216ENST00000490278 UNQ5815/PRO19632Q6UWF5 114 aa0.17□□□□□ -2.38
CD46-216ENST00000490278 SMIM15Q7Z3B0 74 aa0.17□□□□□ -2.38
CD46-216ENST00000490278 OR4S1Q8NGB4 309 aa0.17□□□□□ -2.38
CD46-216ENST00000490278 TMEM14BQ9NUH8 114 aa0.17□□□□□ -2.38
CD46-216ENST00000490278 ZCCHC6Q5VYS8 1495 aaKnown RBP0.16□□□□□ -2.38
CD46-216ENST00000490278 PTPRGP23470 1445 aa0.16□□□□□ -2.38
CD46-216ENST00000490278 TCRAP04437 139 aa0.16□□□□□ -2.38
CD46-216ENST00000490278 CCKP06307 115 aa0.16□□□□□ -2.38
CD46-216ENST00000490278 PSPHP78330 225 aa0.16□□□□□ -2.38
CD46-216ENST00000490278 SKA2Q8WVK7 121 aaPredicted RBP0.16□□□□□ -2.38
CD46-216ENST00000490278 MEGF8Q7Z7M0 2845 aa0.16□□□□□ -2.38
CD46-216ENST00000490278 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
CD46-216ENST00000490278 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.38
CD46-216ENST00000490278 AFDNP55196 1824 aaKnown RBP0.15□□□□□ -2.38
CD46-216ENST00000490278 RBBP6Q7Z6E9 1792 aaKnown RBP0.15□□□□□ -2.39
CD46-216ENST00000490278 CD3DP04234 171 aa0.15□□□□□ -2.39
CD46-216ENST00000490278 SDC4P31431 198 aa0.15□□□□□ -2.39
CD46-216ENST00000490278 POLR2JP52435 117 aaKnown RBP0.15□□□□□ -2.39
CD46-216ENST00000490278 Q5XG85 94 aa0.15□□□□□ -2.39
CD46-216ENST00000490278 SELENOSQ9BQE4 189 aa0.15□□□□□ -2.39
CD46-216ENST00000490278 METTL1Q9UBP6 276 aaKnown RBP0.15□□□□□ -2.39
CD46-216ENST00000490278 CPDO75976 1380 aa0.15□□□□□ -2.39
CD46-216ENST00000490278 BLMP54132 1417 aaPredicted RBP0.14□□□□□ -2.39
CD46-216ENST00000490278 WDR97A6NE52 1622 aa0.14□□□□□ -2.39
CD46-216ENST00000490278 BDP1A6H8Y1 2624 aa0.14□□□□□ -2.39
CD46-216ENST00000490278 A0A096LNT2 108 aa0.14□□□□□ -2.39
CD46-216ENST00000490278 TRBV10-1A0A0K0K1A3 114 aa0.14□□□□□ -2.39
CD46-216ENST00000490278 J3KT08 172 aa0.14□□□□□ -2.39
CD46-216ENST00000490278 HIST1H1BP16401 226 aaKnown RBP0.14□□□□□ -2.39
CD46-216ENST00000490278 MYH1P12882 1939 aa0.14□□□□□ -2.39
CD46-216ENST00000490278 OVOS2A0A0G2JMS6 1433 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 TSTD3H0UI37 97 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 DPM2O94777 84 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 RPS28P62857 69 aaKnown RBP0.13□□□□□ -2.39
CD46-216ENST00000490278 HSD17B12Q53GQ0 312 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 OR8I2Q8N0Y5 310 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 NDUFAF1Q9Y375 327 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 RREB1Q92766 1687 aa0.13□□□□□ -2.39
CD46-216ENST00000490278 KIDINS220Q9ULH0 1771 aa0.12□□□□□ -2.39
CD46-216ENST00000490278 MPC1LP0DKB6 136 aa0.12□□□□□ -2.39
CD46-216ENST00000490278 PLGLB1Q02325 96 aa0.12□□□□□ -2.39
CD46-216ENST00000490278 ESPL1Q14674 2120 aa0.12□□□□□ -2.39
CD46-216ENST00000490278 LRP5O75197 1615 aa0.12□□□□□ -2.39
CD46-216ENST00000490278 DLEC1Q9Y238 1755 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
CD46-216ENST00000490278 TRAV17A0A0B4J275 112 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 TEX49A0A1B0GTD5 131 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 OR2H2O95918 312 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 PAEPP09466 180 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 PPDPFLQ8WWR9 84 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 DSCR8Q96T75 97 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 SLC35B3Q9H1N7 401 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 PROK2Q9HC23 129 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 CALML5Q9NZT1 146 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 HSPB11Q9Y547 144 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 KDM6BO15054 1643 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 ARHGAP31Q2M1Z3 1444 aa0.11□□□□□ -2.39
CD46-216ENST00000490278 SPAG17Q6Q759 2223 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 MAST4O15021 2626 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 TPRP12270 2363 aaKnown RBP0.1□□□□□ -2.39
CD46-216ENST00000490278 APOC1P02654 83 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 VMO1Q7Z5L0 202 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 VPS25Q9BRG1 176 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 TAS2R8Q9NYW2 309 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 GINS2Q9Y248 185 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
CD46-216ENST00000490278 TRAV36DV7A0A075B6V5 113 aa0.09□□□□□ -2.4
CD46-216ENST00000490278 MT-ND4LP03901 98 aa0.09□□□□□ -2.4
CD46-216ENST00000490278 TMEM91Q6ZNR0 172 aa0.09□□□□□ -2.4
CD46-216ENST00000490278 PPP1R1CQ8WVI7 109 aa0.09□□□□□ -2.4
CD46-216ENST00000490278 TMEM141Q96I45 108 aa0.09□□□□□ -2.4
CD46-216ENST00000490278 COA4Q9NYJ1 87 aa0.09□□□□□ -2.4
CD46-216ENST00000490278 TANC1Q9C0D5 1861 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 ANK2Q01484 3957 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 CXorf51AA0A1B0GTR3 108 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 A0A1B0GX51 115 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 C9JAW5 83 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 MCRIP1C9JLW8 97 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 AKR1D1P51857 326 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 OR8B8Q15620 311 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 SLC25A26Q70HW3 274 aa0.08□□□□□ -2.4
CD46-216ENST00000490278 TRAV12-2A0A075B6T6 113 aa0.07□□□□□ -2.4
CD46-216ENST00000490278 TRAV2A0A0B4J234 112 aa0.07□□□□□ -2.4
CD46-216ENST00000490278 GNG14A0A1W2PPG7 69 aa0.07□□□□□ -2.4
CD46-216ENST00000490278 H0YJX3 145 aa0.07□□□□□ -2.4
CD46-216ENST00000490278 SMIM24O75264 130 aa0.07□□□□□ -2.4
CD46-216ENST00000490278 NBEAP1P0C6P0 100 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms