RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 LYRM2Q9NU23 88 aaPredicted RBP9.22□□□□□ -0.93
VARS-227ENST00000489979 RBAKDNA6NC62 111 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 C5orf51A6NDU8 294 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 PVALBP20472 110 aaPredicted RBP9.21□□□□□ -0.94
VARS-227ENST00000489979 HBG1P69891 147 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 HBG2P69892 147 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 LAGE3Q14657 143 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 TDRG1Q3Y452 100 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 LELP1Q5T871 98 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 STX12Q86Y82 276 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 SLC25A29Q8N8R3 303 aa9.21□□□□□ -0.94
VARS-227ENST00000489979 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
VARS-227ENST00000489979 S100A10P60903 97 aa9.2□□□□□ -0.94
VARS-227ENST00000489979 RANP62826 216 aaKnown RBP9.2□□□□□ -0.94
VARS-227ENST00000489979 ATP6V1FQ16864 119 aa9.2□□□□□ -0.94
VARS-227ENST00000489979 MZT2BQ6NZ67 158 aa9.2□□□□□ -0.94
VARS-227ENST00000489979 Q8N3U1 123 aa9.2□□□□□ -0.94
VARS-227ENST00000489979 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
VARS-227ENST00000489979 LYRM1O43325 122 aa9.19□□□□□ -0.94
VARS-227ENST00000489979 TYMSP04818 313 aa9.19□□□□□ -0.94
VARS-227ENST00000489979 C2orf50Q96LR7 162 aa9.19□□□□□ -0.94
VARS-227ENST00000489979 PRADC1Q9BSG0 188 aa9.19□□□□□ -0.94
VARS-227ENST00000489979 DIRC3C9JPN6 131 aa9.18□□□□□ -0.94
VARS-227ENST00000489979 RHOHQ15669 191 aa9.18□□□□□ -0.94
VARS-227ENST00000489979 THAP6Q8TBB0 222 aa9.18□□□□□ -0.94
VARS-227ENST00000489979 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
VARS-227ENST00000489979 SDHCQ99643 169 aaPredicted RBP9.18□□□□□ -0.94
VARS-227ENST00000489979 CHAC1Q9BUX1 264 aa9.18□□□□□ -0.94
VARS-227ENST00000489979 GTSF1LQ9H1H1 148 aa9.18□□□□□ -0.94
VARS-227ENST00000489979 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 IGHV3-73A0A0B4J1V6 119 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 TRBV6-4A0A1B0GX49 114 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 OR7C2O60412 319 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 RAB32Q13637 225 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 ATP6V0E2Q8NHE4 81 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 SEC22CQ9BRL7 303 aa9.17□□□□□ -0.94
VARS-227ENST00000489979 TRAV21A0A0B4J279 112 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 RBFOX3A6NFN3 312 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 RS1O15537 224 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 DEFA1P59665 94 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 DEFA3P59666 94 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 DPPA3Q6W0C5 159 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 CIRBP-AS1Q8TBR5 109 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 TMED6Q8WW62 240 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 HYLS1Q96M11 299 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
VARS-227ENST00000489979 F6UZH7 168 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 UPK1BO75841 260 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
VARS-227ENST00000489979 NHLH2Q02577 135 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 IL15RAQ13261 267 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 ASAH1Q13510 395 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 ZNF876PQ49A33 203 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
VARS-227ENST00000489979 ENKURQ8TC29 256 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 ATP5SQ99766 215 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
VARS-227ENST00000489979 RPH3ALQ9UNE2 315 aa9.15□□□□□ -0.94
VARS-227ENST00000489979 TRAV6A0A075B6T7 132 aa9.14□□□□□ -0.95
VARS-227ENST00000489979 CIDEAO60543 219 aa9.14□□□□□ -0.95
VARS-227ENST00000489979 TOR2AQ5JU69 321 aa9.14□□□□□ -0.95
VARS-227ENST00000489979 OR5C1Q8NGR4 320 aa9.14□□□□□ -0.95
VARS-227ENST00000489979 ASB13Q8WXK3 278 aa9.14□□□□□ -0.95
VARS-227ENST00000489979 KCNS1Q96KK3 526 aa9.14□□□□□ -0.95
VARS-227ENST00000489979 GGTLC3B5MD39 225 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 PLA2G10O15496 165 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 TCRBP04435 133 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 Q8N976 141 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 TVP23CQ96ET8 276 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 KCNIP2Q9NS61 270 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
VARS-227ENST00000489979 RNF222A6NCQ9 220 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 PGPA6NDG6 321 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 IGLV2-8P01709 118 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 ACOT6Q3I5F7 207 aaPredicted RBP9.12□□□□□ -0.95
VARS-227ENST00000489979 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 CMTM2Q8TAZ6 248 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 NMES1Q9C002 83 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 WDR61Q9GZS3 305 aaKnown RBP9.12□□□□□ -0.95
VARS-227ENST00000489979 TREM1Q9NP99 234 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 NUDT15Q9NV35 164 aa9.12□□□□□ -0.95
VARS-227ENST00000489979 TRAV8-1A0A0A6YYK1 113 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 GAGE12JA6NER3 117 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 EIF3GO75821 320 aaKnown RBP eCLIP9.11□□□□□ -0.95
VARS-227ENST00000489979 H2AFB2P0C5Z0 115 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
VARS-227ENST00000489979 GAGE1Q13065 139 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 GAGE4Q13068 117 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 GAGE5Q13069 117 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 GAGE13Q4V321 117 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 RMI2Q96E14 147 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 DNAJC30Q96LL9 226 aa9.11□□□□□ -0.95
VARS-227ENST00000489979 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 PGPEP1LA6NFU8 196 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 C17orf112F2Z3M2 114 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 HNRNPA3P51991 378 aaKnown RBP9.1□□□□□ -0.95
VARS-227ENST00000489979 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms