RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 SPXQ9BT56 116 aa7.65□□□□□ -1.18
RAB11FIP3-210ENST00000487899 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TRAV21A0A0B4J279 112 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TRGV4A0A0C4DH28 118 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 G3V3Q6 166 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 IGLV2-11P01706 119 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TCRAP04437 139 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 ZNF80P51504 273 aaPredicted RBP7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 LYPD5Q6UWN5 251 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 WFDC10BQ8IUB3 73 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 SGK494Q96LW2 274 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 MED28Q9H204 178 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TREM1Q9NP99 234 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 C11orf21Q9P2W6 132 aa7.64□□□□□ -1.19
RAB11FIP3-210ENST00000487899 GNRH2O43555 120 aa7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 GIPP09681 153 aaPredicted RBP7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 GYPEP15421 78 aa7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 SLAQ13239 276 aa7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 ZNF726P1Q15940 193 aa7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 MRPL23Q16540 153 aaKnown RBP7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 NEGR1Q7Z3B1 354 aa7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TMEM75Q8N9X5 138 aa7.63□□□□□ -1.19
RAB11FIP3-210ENST00000487899 LOC100131303A0A0U1RQF7 123 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 SERTM2A0A1B0GWG4 89 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 M0R2P5 195 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 SRIP30626 198 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 SERF2P84101 59 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 RPL7L1Q6DKI1 246 aaKnown RBP7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 SDF2L1Q9HCN8 221 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TNFSF18Q9UNG2 199 aa7.62□□□□□ -1.19
RAB11FIP3-210ENST00000487899 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 CYB561D1Q8N8Q1 229 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 PCNPQ8WW12 178 aaKnown RBP7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 ASB13Q8WXK3 278 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TNFRSF18Q9Y5U5 241 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 HERC1Q15751 4861 aa7.61□□□□□ -1.19
RAB11FIP3-210ENST00000487899 FXYD6-FXYD2A0A087WZ82 144 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 C9JCJ5 164 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 CXorf1O96002 111 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 GCGP01275 180 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 MBP02144 154 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 ORM1P02763 201 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 PFN1P07737 140 aaKnown RBP7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 GATA1P15976 413 aaPredicted RBP7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 FLI1Q01543 452 aaPredicted RBP7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 MAPKAPK5-AS1Q8N8E1 139 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 OR4C5Q8NGB2 326 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 KCNS1Q96KK3 526 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 NDFIP1Q9BT67 221 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 PSG8Q9UQ74 426 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 FAT1Q14517 4588 aa7.6□□□□□ -1.19
RAB11FIP3-210ENST00000487899 RNASE3P12724 160 aaKnown RBP7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 FUSP35637 526 aaKnown RBP eCLIP7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 ZNF506Q5JVG8 444 aa7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 CFAP126Q5VTH2 177 aa7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 Q86TA4 180 aa7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 OR2T35Q8NGX2 323 aa7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 ACTR3CQ9C0K3 210 aaPredicted RBP7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 EPDR1Q9UM22 224 aa7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.19
RAB11FIP3-210ENST00000487899 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 A0A1W2PRE2 83 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 FBLL1A6NHQ2 334 aaKnown RBP7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 K7EQM0 130 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 ZNF876PQ49A33 203 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 SMUG1Q53HV7 270 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 INO80EQ8NBZ0 244 aaPredicted RBP7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 LINC00479Q96M42 142 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 TXNDC17Q9BRA2 123 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 ARL2-SNX15V9GYD0 113 aa7.58□□□□□ -1.2
RAB11FIP3-210ENST00000487899 TAAR5O14804 337 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 RS1O15537 224 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 FGF8P55075 233 aaPredicted RBP7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 TIRAPP58753 221 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 UBE2G2P60604 165 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 ERVFC1-1P60608 527 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 ZFP69Q49AA0 526 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 Q8N1X5 172 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 MSRB1Q9NZV6 116 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
RAB11FIP3-210ENST00000487899 A0A087WTM6 91 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 BORCS7-ASMTA0A0B4J1R7 106 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 IGKV3D-20A0A0C4DH25 116 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 PGPEP1LA6NFU8 196 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 FAM74A7A6NL05 159 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 K7EP13 123 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 PEX7O00628 323 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 NHLRC2Q8NBF2 726 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 PTH2Q96A98 100 aa7.56□□□□□ -1.2
RAB11FIP3-210ENST00000487899 CYTL1Q9NRR1 136 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms