RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 QRICH2Q9H0J4 1663 aa1.42□□□□□ -2.18
LAPTM4A-202ENST00000483117 PTPRBP23467 1997 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 PPIP5K1Q6PFW1 1433 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 MALRD1Q5VYJ5 2156 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 POLEQ07864 2286 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 CCDC88CQ9P219 2028 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 LOC107984156A0A0G2JMH3 177 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 FAM24AA6NFZ4 105 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 TMEM262E9PQX1 116 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 H3BQ15 152 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 SNCGO76070 127 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 SPINK8P0C7L1 97 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 RNASE2P10153 161 aaKnown RBP1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 ATP5EP56381 51 aaPredicted RBP1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 CNBPP62633 177 aaKnown RBP1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 Q1T7F1 81 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 DEFB113Q30KQ7 82 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 C1orf137Q5JT78 98 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 Q6ZS92 163 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 LINC00299Q6ZSB3 139 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 NDUFA11Q86Y39 141 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 ARL17AQ8IVW1 177 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 TSKUQ8WUA8 353 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 ORMDL1Q9P0S3 153 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 AP4S1Q9Y587 144 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 ABCC10Q5T3U5 1492 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 PRR14LQ5THK1 2151 aa1.41□□□□□ -2.18
LAPTM4A-202ENST00000483117 ANAPC1Q9H1A4 1944 aa1.4□□□□□ -2.18
LAPTM4A-202ENST00000483117 SCN8AQ9UQD0 1980 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 CPAMD8Q8IZJ3 1885 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRGV4A0A0C4DH28 118 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 A0A0G2JQZ4 141 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 A0A1W2PRS3 328 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 SSSCA1O60232 199 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 LINC00032P0C843 101 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 FAM74A1Q5RGS3 127 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 NCMAPQ5T1S8 102 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 CLECL1Q8IZS7 167 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 C4orf33Q8N1A6 199 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 C5orf17Q8NAS9 161 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 TMEM141Q96I45 108 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 V9GYS6 101 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 ATG2AQ2TAZ0 1938 aa1.4□□□□□ -2.19
LAPTM4A-202ENST00000483117 MYO5AQ9Y4I1 1855 aaKnown RBP1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 TEX14Q8IWB6 1497 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 CECR2Q9BXF3 1484 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 RAPGEF2Q9Y4G8 1499 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 A0A1W2PNN7 141 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 A6NIN4 97 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 F8W1H4 67 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 H3BRN7 92 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 PIRTP0C851 137 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 POLR2JP52435 117 aaKnown RBP1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 S100A10P60903 97 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 RHOHQ15669 191 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 IQCJQ1A5X6 159 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 HCP5Q6MZN7 132 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 Q8TAT8 98 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 LINC00052Q96N35 136 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 DPY30Q9C005 99 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 Q9H521 79 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 KDM6BO15054 1643 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 PLXNA3P51805 1871 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 CCDC88AQ3V6T2 1871 aa1.39□□□□□ -2.19
LAPTM4A-202ENST00000483117 ADGRL2O95490 1459 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 COL24A1Q17RW2 1714 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 UBE2L5PA0A1B0GUS4 154 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 CCL16O15467 120 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 CBLN1P23435 193 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 UBE2L3P68036 154 aaKnown RBP1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 DCDP81605 110 aaKnown RBP1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 TPRXLQ17RH7 258 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 RPL7L1Q6DKI1 246 aaKnown RBP1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 SLC48A1Q6P1K1 146 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 UNQ5815/PRO19632Q6UWF5 114 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 ZCCHC23Q6ZST2 131 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 FP248Q71RG6 208 aaPredicted RBP1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 PATE1Q8WXA2 126 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 LSM10Q969L4 123 aaKnown RBP1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 SNHG12Q9BXW3 62 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 LAMB2P55268 1798 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRPM6Q9BX84 2022 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 SEC16AO15027 2179 aa1.38□□□□□ -2.19
LAPTM4A-202ENST00000483117 BCORL1Q5H9F3 1711 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 IFT140Q96RY7 1462 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 FYCO1Q9BQS8 1478 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 KIDINS220Q9ULH0 1771 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 IGLV3-32A0A0A0MS00 114 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 A0A0J9YY99 117 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 OOSP1A8MZH6 123 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 H3BRM9 83 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 C10orf55Q5SWW7 151 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 C5orf38Q86SI9 138 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 TXNDC17Q9BRA2 123 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 ATG5Q9H1Y0 275 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 TMEM106BQ9NUM4 274 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 NDUFA12Q9UI09 145 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms