RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SFT2D2O95562 160 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 CDS2O95674 445 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 HLA-AP01891 365 aaKnown RBP2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TCRBP04435 133 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 LGALS1P09382 135 aaKnown RBP2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TRAPPC2P0DI81 140 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TRAPPC2BP0DI82 140 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 OR13C7P0DN81 318 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 PSMB6P28072 239 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 SLC6A1P30531 599 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 RBX1P62877 108 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 RHOGP84095 191 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM267Q0VDI3 215 aaPredicted RBP2.73□□□□□ -1.97
UPF3A-207ENST00000481131 DHRS2Q13268 280 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 NMSQ5H8A3 153 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 SGPP2Q8IWX5 399 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TTC9CQ8N5M4 171 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TCTEX1D1Q8N7M0 179 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 OR1L8Q8NGR8 309 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 VSTM2AQ8TAG5 236 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 C4orf3Q8WVX3 66 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 RBPMSQ93062 196 aaKnown RBP2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM56Q96MV1 263 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 METTL26Q96S19 204 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 C7orf50Q9BRJ6 194 aaKnown RBP2.73□□□□□ -1.97
UPF3A-207ENST00000481131 COMMD5Q9GZQ3 224 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 NDUFA4L2Q9NRX3 87 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM56-RWDD3S4R434 201 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 MEGF8Q7Z7M0 2845 aa2.73□□□□□ -1.97
UPF3A-207ENST00000481131 CREBL2O60519 120 aaPredicted RBP2.72□□□□□ -1.97
UPF3A-207ENST00000481131 IFNA17P01571 189 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 OR4E1P0C645 316 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 SEC11BP0C7V7 166 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 IAPPP10997 89 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 HSPE1P61604 102 aaKnown RBP2.72□□□□□ -1.97
UPF3A-207ENST00000481131 PRCDQ00LT1 54 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 TMEM128Q5BJH2 165 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 LINC00299Q6ZSB3 139 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 LYG2Q86SG7 212 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 OR11H1Q8NG94 326 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 ORAOV1Q8WV07 137 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 LSM10Q969L4 123 aaKnown RBP2.72□□□□□ -1.97
UPF3A-207ENST00000481131 TSC22D3Q99576 134 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 SLC25A21Q9BQT8 299 aaPredicted RBP2.72□□□□□ -1.97
UPF3A-207ENST00000481131 MRPL36Q9P0J6 103 aaKnown RBP2.72□□□□□ -1.97
UPF3A-207ENST00000481131 PRNDQ9UKY0 176 aa2.72□□□□□ -1.97
UPF3A-207ENST00000481131 PRKDCP78527 4128 aaKnown RBP2.71□□□□□ -1.97
UPF3A-207ENST00000481131 FAM223BA6NKX1 122 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 CEBPZOSA8MTT3 80 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 H3BP45 60 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 H3BUA1 57 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 K7EIM0 57 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 PITX3O75364 302 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SIX6O95475 246 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SULT1A3P0DMM9 295 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SULT1A4P0DMN0 295 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 RNASE2P10153 161 aaKnown RBP2.71□□□□□ -1.98
UPF3A-207ENST00000481131 DEFA4P12838 97 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 RUNX1Q01196 453 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 ATP5G2Q06055 141 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 TNFRSF9Q07011 255 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SMCO1Q147U7 214 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 FAM104BQ5XKR9 115 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 DAZ4Q86SG3 579 aaKnown RBP2.71□□□□□ -1.98
UPF3A-207ENST00000481131 FAM223AQ8IWN6 122 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 LYPD1Q8N2G4 141 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SMIM8Q96KF7 97 aa2.71□□□□□ -1.98
UPF3A-207ENST00000481131 DAZ1Q9NQZ3 744 aaKnown RBP2.71□□□□□ -1.98
UPF3A-207ENST00000481131 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.71□□□□□ -1.98
UPF3A-207ENST00000481131 SORL1Q92673 2214 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.7□□□□□ -1.98
UPF3A-207ENST00000481131 DUXBA0A1W2PPF3 345 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 OR2T8A6NH00 312 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 FAM25EA8MYX2 175 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 INMT-MINDY4F8WBC2 141 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 I3L2K1 104 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 OVOL1O14753 267 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 SSSCA1O60232 199 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 ATG12O94817 140 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 BRI3O95415 125 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 MT-CO2P00403 227 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 SPCS3P61009 180 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 POLR2GP62487 172 aaKnown RBP eCLIP2.7□□□□□ -1.98
UPF3A-207ENST00000481131 IAH1Q2TAA2 248 aaPredicted RBP2.7□□□□□ -1.98
UPF3A-207ENST00000481131 KLK9Q2XQG4 91 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 BSXQ3C1V8 233 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 TMEM136Q6ZRR5 245 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 C12orf45Q8N5I9 185 aaPredicted RBP2.7□□□□□ -1.98
UPF3A-207ENST00000481131 OR1P1Q8NH06 330 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 LRRC20Q8TCA0 184 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 DTD1Q8TEA8 209 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 ZNF431Q8TF32 576 aaPredicted RBP2.7□□□□□ -1.98
UPF3A-207ENST00000481131 USMG5Q96IX5 58 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 OR4C12Q96R67 309 aa2.7□□□□□ -1.98
UPF3A-207ENST00000481131 PDCD10Q9BUL8 212 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms