RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FAM167A-AS1Q96KT0 104 aa11.11□□□□□ -0.63
NPHP4-208ENST00000478423 PRRC2AP48634 2157 aaKnown RBP11.11□□□□□ -0.63
NPHP4-208ENST00000478423 SDHAF1A6NFY7 115 aa11.11□□□□□ -0.63
NPHP4-208ENST00000478423 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-208ENST00000478423 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
NPHP4-208ENST00000478423 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-208ENST00000478423 NDUFS6O75380 124 aaKnown RBP11.1□□□□□ -0.63
NPHP4-208ENST00000478423 Q6ZWC4 215 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 EPG5Q9HCE0 2579 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 PKD1L2Q7Z442 2459 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 NPYP01303 97 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 CRPP02741 224 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 P0C879 139 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 FOXE3Q13461 319 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 TP53TG1Q9Y2A0 90 aa11.1□□□□□ -0.63
NPHP4-208ENST00000478423 DEFB121Q5J5C9 76 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 C5orf56Q8N8D9 126 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 BUB3O43684 328 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 CFHR3Q02985 330 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 MORN3Q6PF18 240 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-208ENST00000478423 Q8N8P6 123 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 PLEKHB2Q96CS7 222 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 ATP6V0BQ99437 205 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 SIRPDQ9H106 197 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
NPHP4-208ENST00000478423 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
NPHP4-208ENST00000478423 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
NPHP4-208ENST00000478423 SPXQ9BT56 116 aa11.08□□□□□ -0.64
NPHP4-208ENST00000478423 CRYGCP07315 174 aa11.08□□□□□ -0.64
NPHP4-208ENST00000478423 LINC00158P58513 81 aa11.08□□□□□ -0.64
NPHP4-208ENST00000478423 LY6G5BQ8NDX9 201 aa11.08□□□□□ -0.64
NPHP4-208ENST00000478423 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
NPHP4-208ENST00000478423 TNRC6AQ8NDV7 1962 aaKnown RBP11.08□□□□□ -0.64
NPHP4-208ENST00000478423 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 A8MWV9 139 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 NEGR1Q7Z3B1 354 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE12JA6NER3 117 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 LMO4P61968 165 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE1Q13065 139 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE4Q13068 117 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE5Q13069 117 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE13Q4V321 117 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 C19orf84I3L1E1 186 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 NPC2P61916 151 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
NPHP4-208ENST00000478423 SPRY2O43597 315 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 GNRH2O43555 120 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 SAMD5Q5TGI4 173 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE7O76087 117 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
NPHP4-208ENST00000478423 C11orf68Q9H3H3 251 aaKnown RBP11.06□□□□□ -0.64
NPHP4-208ENST00000478423 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
NPHP4-208ENST00000478423 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
NPHP4-208ENST00000478423 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
NPHP4-208ENST00000478423 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
NPHP4-208ENST00000478423 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 BRCA2P51587 3418 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 AZU1P20160 251 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 C1orf229Q6ZS94 237 aaPredicted RBP11.05□□□□□ -0.64
NPHP4-208ENST00000478423 CKS1BP61024 79 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 CFHR4Q92496 578 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 MRPL53Q96EL3 112 aaKnown RBP11.05□□□□□ -0.64
NPHP4-208ENST00000478423 PRORYQ9H606 182 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 CCL24O00175 119 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 PAX2Q02962 417 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 NUP210LQ5VU65 1888 aa11.05□□□□□ -0.64
NPHP4-208ENST00000478423 SLURP1P55000 103 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 RASL10AQ92737 203 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 MEGF9Q9H1U4 602 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 PLA2G5P39877 138 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 CHAC1Q9BUX1 264 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 POLQO75417 2590 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 HCFC1P51610 2035 aa11.04□□□□□ -0.64
NPHP4-208ENST00000478423 ESDP10768 282 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 ZNF295-AS1Q8N0V1 137 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 A0A0C4DFX4 3053 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 KIAA1549Q9HCM3 1950 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 RBAKDNA6NC62 111 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 I3L3M4 83 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
NPHP4-208ENST00000478423 IGLC3P0DOY3 106 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms