RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 HIST1H2BNQ99877 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 HIST1H2BMQ99879 126 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 C19orf73Q9NVV2 129 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 TRAPPC1Q9Y5R8 145 aa10.67□□□□□ -0.7
COL4A6-206ENST00000477085 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 MUC21A0A0G2JKD1 596 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 MUC21A0A140T8X8 626 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 TRGC1P0CF51 173 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 FXYD7P58549 80 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 MUC21Q5SSG8 566 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 OR2K2Q8NGT1 345 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 ZNF747Q9BV97 191 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 TPPP3Q9BW30 176 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 GNB1LQ9BYB4 327 aa10.66□□□□□ -0.7
COL4A6-206ENST00000477085 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
COL4A6-206ENST00000477085 CRXO43186 299 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-206ENST00000477085 LEPP41159 167 aa10.65□□□□□ -0.7
COL4A6-206ENST00000477085 RPS20P60866 119 aaKnown RBP10.65□□□□□ -0.7
COL4A6-206ENST00000477085 TRAV12-3A0A0B4J271 114 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 CDKN1BP46527 198 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 CAMPP49913 170 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 ANXA2RQ3ZCQ2 193 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 ATP5L2Q7Z4Y8 100 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.71
COL4A6-206ENST00000477085 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 NAGKQ9UJ70 344 aa10.65□□□□□ -0.71
COL4A6-206ENST00000477085 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
COL4A6-206ENST00000477085 C7orf71A4D174 169 aa10.64□□□□□ -0.71
COL4A6-206ENST00000477085 GNRH2O43555 120 aa10.64□□□□□ -0.71
COL4A6-206ENST00000477085 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
COL4A6-206ENST00000477085 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
COL4A6-206ENST00000477085 SSTP61278 116 aa10.64□□□□□ -0.71
COL4A6-206ENST00000477085 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
COL4A6-206ENST00000477085 FER1L6-AS1Q8NA97 138 aa10.64□□□□□ -0.71
COL4A6-206ENST00000477085 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 OR11H12B2RN74 326 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 HOXA5P20719 270 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 CTRLP40313 264 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 SLAQ13239 276 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 WFDC9Q8NEX5 89 aa10.63□□□□□ -0.71
COL4A6-206ENST00000477085 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-206ENST00000477085 NDUFA6P56556 154 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 RAB4BP61018 213 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 HBBP68871 147 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 WDR73Q6P4I2 378 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 SPRY2O43597 315 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 S100A8P05109 93 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 TSPOP30536 169 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 KIAA1644Q3SXP7 199 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 MSRB1Q9NZV6 116 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
COL4A6-206ENST00000477085 C9orf66Q5T8R8 295 aa10.61□□□□□ -0.71
COL4A6-206ENST00000477085 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
COL4A6-206ENST00000477085 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
COL4A6-206ENST00000477085 CNFNQ9BYD5 112 aa10.61□□□□□ -0.71
COL4A6-206ENST00000477085 NTF3P20783 257 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 INSL3P51460 131 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 RIGQ13278 110 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 COX19Q49B96 90 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 CMYA5Q8N3K9 4069 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 STAB1Q9NY15 2570 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 IFITM10A6NMD0 228 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 SNAI2O43623 268 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 HLA-DQA1P01909 254 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 APCSP02743 223 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 MT-ND6P03923 174 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 RNASE3P12724 160 aaKnown RBP10.6□□□□□ -0.71
COL4A6-206ENST00000477085 IGLL1P15814 213 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 C3orf56Q8N813 242 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
COL4A6-206ENST00000477085 F2Z2F3 143 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 H3BVH4 76 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 PRM2P04554 102 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 OR5AL1P0C617 328 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 SMIM6P0DI80 62 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 STHQ8IWL8 128 aa10.59□□□□□ -0.71
COL4A6-206ENST00000477085 GIG44P09565 113 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-206ENST00000477085 CMC4P56277 68 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-206ENST00000477085 TWIST1Q15672 202 aa10.58□□□□□ -0.72
COL4A6-206ENST00000477085 DNLZQ5SXM8 178 aa10.58□□□□□ -0.72
COL4A6-206ENST00000477085 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
COL4A6-206ENST00000477085 HIST3H2BBQ8N257 126 aa10.58□□□□□ -0.72
COL4A6-206ENST00000477085 C12orf57Q99622 126 aa10.58□□□□□ -0.72
COL4A6-206ENST00000477085 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
COL4A6-206ENST00000477085 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 C12orf54Q6X4T0 127 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 DEFB125Q8N687 156 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 TIMM8BQ9Y5J9 83 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-206ENST00000477085 IGHV1OR15-1A0A075B7D0 117 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 A0A1B0GW15 77 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 ASIPP42127 132 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 Q8N1Y9 231 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
COL4A6-206ENST00000477085 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms