RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PET117Q6UWS5 81 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 Q6ZQT7 251 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 Q8TAT8 98 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 PHLDA1Q8WV24 401 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-208ENST00000476739 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 ODF3Q96PU9 254 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 LINC01587Q99440 93 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
HDAC3-208ENST00000476739 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
HDAC3-208ENST00000476739 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
HDAC3-208ENST00000476739 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
HDAC3-208ENST00000476739 TRBV24-1A0A075B6N3 115 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 TRAV12-3A0A0B4J271 114 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 CTXND1A0A1B0GTU2 59 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 PLAC8L1A1L4L8 177 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 CXorf1O96002 111 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 FABP4P15090 132 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 HTN1P15515 57 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 G0S2P27469 103 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 LEPP41159 167 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 CEMP1Q6PRD7 247 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-208ENST00000476739 Q6ZTC4 211 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 ZFAND2AQ8N6M9 145 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 TVP23CQ96ET8 276 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 PRO1933Q9H354 126 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 ZNF492Q9P255 531 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 RPH3ALQ9UNE2 315 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 YTHDF2Q9Y5A9 579 aaKnown RBP6.93□□□□□ -1.3
HDAC3-208ENST00000476739 LYSTQ99698 3801 aa6.93□□□□□ -1.3
HDAC3-208ENST00000476739 KLLNB2CW77 178 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 GGTLC3B5MD39 225 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 PPBPP02775 128 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 GZMBP10144 247 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 CRISP2P16562 243 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 TSPOP30536 169 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 TAGLN2P37802 199 aaKnown RBP6.92□□□□□ -1.3
HDAC3-208ENST00000476739 CSN1S1P47710 185 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 TMEM78Q5T7P6 136 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 FAM222AQ5U5X8 452 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 DPPA3Q6W0C5 159 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 FAM210BQ96KR6 192 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 SGK494Q96LW2 274 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 IMMP2LQ96T52 175 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 RYR3Q15413 4870 aa6.92□□□□□ -1.3
HDAC3-208ENST00000476739 TRAV8-1A0A0A6YYK1 113 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 C20orf202A1L168 122 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 TMEM189A5PLL7 270 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 MAP1LC3B2A6NCE7 125 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 NUPR2A6NF83 97 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-208ENST00000476739 SPART-AS1P0CW21 52 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 RNASE4P34096 147 aaKnown RBP6.91□□□□□ -1.3
HDAC3-208ENST00000476739 ZNF138P52744 262 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 CEBPGP53567 150 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 UBE2G2P60604 165 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 SUMO1P63165 101 aaKnown RBP6.91□□□□□ -1.3
HDAC3-208ENST00000476739 ELOBQ15370 118 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 GOLT1AQ6ZVE7 132 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 TMEM256Q8N2U0 113 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 CMTM2Q8TAZ6 248 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 ISOC2Q96AB3 205 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 NIPSNAP3BQ9BS92 247 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 MAP1LC3BQ9GZQ8 125 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 TMEM167BQ9NRX6 74 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
HDAC3-208ENST00000476739 RYR2Q92736 4967 aa6.9□□□□□ -1.3
HDAC3-208ENST00000476739 C7orf71A4D174 169 aa6.9□□□□□ -1.3
HDAC3-208ENST00000476739 H7BYZ3 331 aa6.9□□□□□ -1.3
HDAC3-208ENST00000476739 SLC25A5P05141 298 aaKnown RBP6.9□□□□□ -1.3
HDAC3-208ENST00000476739 GPX1P07203 203 aa6.9□□□□□ -1.3
HDAC3-208ENST00000476739 TRGC1P0CF51 173 aa6.9□□□□□ -1.3
HDAC3-208ENST00000476739 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
HDAC3-208ENST00000476739 HYDINQ4G0P3 5121 aa6.9□□□□□ -1.31
HDAC3-208ENST00000476739 SACSQ9NZJ4 4579 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 LCE6AA0A183 80 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 A0A1B0GV50 99 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 A0A1W2PRE2 83 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 IGLV2-11P01706 119 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 TCRAP04437 139 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 C16orf74Q96GX8 76 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 MIEN1Q9BRT3 115 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 TP53TG3Q9ULZ0 132 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 EPDR1Q9UM22 224 aa6.89□□□□□ -1.31
HDAC3-208ENST00000476739 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 C9JQL5 133 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms