RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
VARS-223ENST00000474643 CYB561D1Q8N8Q1 229 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
VARS-223ENST00000474643 C11orf52Q96A22 123 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 TREM1Q9NP99 234 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 MED9Q9NWA0 146 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
VARS-223ENST00000474643 TRBV6-1A0A0K0K1D8 114 aa10.66□□□□□ -0.7
VARS-223ENST00000474643 ZNF324O75467 553 aaPredicted RBP10.66□□□□□ -0.7
VARS-223ENST00000474643 CCL18P55774 89 aa10.66□□□□□ -0.7
VARS-223ENST00000474643 FAM3BP58499 235 aaPredicted RBP10.66□□□□□ -0.7
VARS-223ENST00000474643 ZNF506Q5JVG8 444 aa10.66□□□□□ -0.7
VARS-223ENST00000474643 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
VARS-223ENST00000474643 NAGKQ9UJ70 344 aa10.66□□□□□ -0.7
VARS-223ENST00000474643 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
VARS-223ENST00000474643 TMEM250H0YL14 139 aa10.65□□□□□ -0.7
VARS-223ENST00000474643 OR5I1Q13606 314 aa10.65□□□□□ -0.7
VARS-223ENST00000474643 MUC21Q5SSG8 566 aa10.65□□□□□ -0.7
VARS-223ENST00000474643 PRNTQ86SH4 94 aa10.65□□□□□ -0.7
VARS-223ENST00000474643 PSG8Q9UQ74 426 aa10.65□□□□□ -0.7
VARS-223ENST00000474643 PLAC8L1A1L4L8 177 aa10.64□□□□□ -0.71
VARS-223ENST00000474643 RAB19A4D1S5 217 aa10.64□□□□□ -0.71
VARS-223ENST00000474643 PEX7O00628 323 aa10.64□□□□□ -0.71
VARS-223ENST00000474643 RTL8CO15255 209 aa10.64□□□□□ -0.71
VARS-223ENST00000474643 FLI1Q01543 452 aaPredicted RBP10.64□□□□□ -0.71
VARS-223ENST00000474643 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
VARS-223ENST00000474643 FMC1Q96HJ9 113 aa10.64□□□□□ -0.71
VARS-223ENST00000474643 TRAV21A0A0B4J279 112 aa10.63□□□□□ -0.71
VARS-223ENST00000474643 ANXA2RQ3ZCQ2 193 aa10.63□□□□□ -0.71
VARS-223ENST00000474643 Q6ZQT7 251 aa10.63□□□□□ -0.71
VARS-223ENST00000474643 LINC00467Q9BRT7 94 aa10.63□□□□□ -0.71
VARS-223ENST00000474643 EIF5A2Q9GZV4 153 aaKnown RBP10.63□□□□□ -0.71
VARS-223ENST00000474643 GSN-AS1Q9NRJ2 163 aa10.63□□□□□ -0.71
VARS-223ENST00000474643 DNAH2Q9P225 4427 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 TRAV34A0A0B4J273 112 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 GAGE12BA1L429 117 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 GAGE7O76087 117 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 GAGE12FP0CL80 117 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 GAGE12GP0CL81 117 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 GAGE12IP0CL82 117 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 ZNF415Q09FC8 603 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 PEA15Q15121 130 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 TMEM183BQ1AE95 376 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 SAPCD1Q5SSQ6 148 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 Q6AWC8 147 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 COX8CQ7Z4L0 72 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 SMIM12Q96EX1 92 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 ZFP30Q9Y2G7 519 aa10.62□□□□□ -0.71
VARS-223ENST00000474643 IGLV2-11P01706 119 aa10.61□□□□□ -0.71
VARS-223ENST00000474643 UBE2G1P62253 170 aa10.61□□□□□ -0.71
VARS-223ENST00000474643 SMUG1Q53HV7 270 aa10.61□□□□□ -0.71
VARS-223ENST00000474643 Q6ZR54 194 aa10.61□□□□□ -0.71
VARS-223ENST00000474643 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
VARS-223ENST00000474643 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
VARS-223ENST00000474643 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 TRGV2A0A075B6R0 118 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 TRGV1A0A0A0MS02 117 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 MED14OSP0DP75 135 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 AKR1C3P42330 323 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
VARS-223ENST00000474643 TOR2AQ5JU69 321 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 IBA57Q5T440 356 aaKnown RBP10.6□□□□□ -0.71
VARS-223ENST00000474643 UQCC3Q6UW78 93 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 LINC00479Q96M42 142 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 FAT2Q9NYQ8 4349 aa10.6□□□□□ -0.71
VARS-223ENST00000474643 TRAV26-1A0A087WT03 109 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 A0A0J9YY99 117 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 LINC00862A6NCI5 91 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 GCGP01275 180 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 TCL1AP56279 114 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
VARS-223ENST00000474643 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
VARS-223ENST00000474643 NBDYA0A0U1RRE5 68 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 SCO2A0A1W2PP80 73 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 LTAP01374 205 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 Q6ZTI0 123 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 Q86TA4 180 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 KCNS1Q96KK3 526 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 PKHD1P08F94 4074 aa10.58□□□□□ -0.72
VARS-223ENST00000474643 C9JCJ5 164 aa10.57□□□□□ -0.72
VARS-223ENST00000474643 RPL35P42766 123 aaKnown RBP10.57□□□□□ -0.72
VARS-223ENST00000474643 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
VARS-223ENST00000474643 C6orf223Q8N319 242 aa10.57□□□□□ -0.72
VARS-223ENST00000474643 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
VARS-223ENST00000474643 PFN1P07737 140 aaKnown RBP10.56□□□□□ -0.72
VARS-223ENST00000474643 SRP19P09132 144 aaKnown RBP10.56□□□□□ -0.72
VARS-223ENST00000474643 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
VARS-223ENST00000474643 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 MLST8Q9BVC4 326 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 LINC00588Q9Y4M8 146 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
VARS-223ENST00000474643 NACAE9PAV3 2078 aa10.55□□□□□ -0.72
VARS-223ENST00000474643 GNRH2O43555 120 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms