RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 GOLT1BQ9Y3E0 138 aa4.82□□□□□ -1.64
SCN9A-206ENST00000472119 TRAV12-3A0A0B4J271 114 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 IGHV4-28A0A0C4DH34 117 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 RBAKDNA6NC62 111 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF705GA8MUZ8 300 aaPredicted RBP4.81□□□□□ -1.64
SCN9A-206ENST00000472119 PAGE4O60829 102 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 IFNA7P01567 189 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 TCRAP04437 139 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 GPX1P07203 203 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 ATP5G3P48201 142 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 EMP1P54849 157 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 BTN1A1Q13410 526 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 PRR9Q5T870 116 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 Q6ZQT7 251 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 Q8NAQ8 132 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 FAM19A4Q96LR4 140 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 LINC00479Q96M42 142 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
SCN9A-206ENST00000472119 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 C7orf71A4D174 169 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 KLLNB2CW77 178 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 HBE1P02100 147 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 MIFP14174 115 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 CRISP2P16562 243 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 AZU1P20160 251 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 TIRAPP58753 221 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 RRN3P1Q2M238 152 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 ZFAND2AQ8N6M9 145 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 ARL6IP6Q8N6S5 226 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 CYB561D1Q8N8Q1 229 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 TVP23CQ96ET8 276 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 NKX6-2Q9C056 277 aaPredicted RBP4.8□□□□□ -1.64
SCN9A-206ENST00000472119 GNG13Q9P2W3 67 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
SCN9A-206ENST00000472119 LOC102723971A0A1B0GUV8 181 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 SMIM9A6NGZ8 99 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 F6UZH7 168 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 TEX46H3BTG2 121 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 H7BYZ3 331 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 K7EQM0 130 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 PEX7O00628 323 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
SCN9A-206ENST00000472119 IGLV2-11P01706 119 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 NMBP08949 121 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 PPT1P50897 306 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 FLI1Q01543 452 aaPredicted RBP4.79□□□□□ -1.64
SCN9A-206ENST00000472119 ZNF767PQ75MW2 155 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 TMEM256Q8N2U0 113 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 PCNPQ8WW12 178 aaKnown RBP4.79□□□□□ -1.64
SCN9A-206ENST00000472119 NIPSNAP3BQ9BS92 247 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 ATG101Q9BSB4 218 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 C11orf68Q9H3H3 251 aaKnown RBP4.79□□□□□ -1.64
SCN9A-206ENST00000472119 TREM1Q9NP99 234 aa4.79□□□□□ -1.64
SCN9A-206ENST00000472119 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 SERTM2A0A1B0GWG4 89 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 C11orf94C9JXX5 98 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 TAS2R60P59551 318 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 MUC21Q5SSG8 566 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 ZFAND6Q6FIF0 208 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 TMEM75Q8N9X5 138 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 HIST1H2BAQ96A08 127 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 C20orf144Q9BQM9 153 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 MANBALQ9NQG1 85 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 CELA1Q9UNI1 258 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 LENEPQ9Y5L5 61 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 ARL2-SNX15V9GYD0 113 aa4.78□□□□□ -1.64
SCN9A-206ENST00000472119 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 CBY3A6NI87 242 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 GCGP01275 180 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 AKR1C3P42330 323 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 ZNF80P51504 273 aaPredicted RBP4.77□□□□□ -1.65
SCN9A-206ENST00000472119 UBE2G1P62253 170 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 SAPCD1Q5SSQ6 148 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 TEX261Q6UWH6 196 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 ZNF680Q8NEM1 530 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 PYGO2Q9BRQ0 406 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 NDFIP1Q9BT67 221 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 NAGKQ9UJ70 344 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 TP53TG3Q9ULZ0 132 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 KLF12Q9Y4X4 402 aa4.77□□□□□ -1.65
SCN9A-206ENST00000472119 IGHV1OR15-1A0A075B7D0 117 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 PLAC8L1A1L4L8 177 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 TMEM189A5PLL7 270 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 FBLL1A6NHQ2 334 aaKnown RBP4.76□□□□□ -1.65
SCN9A-206ENST00000472119 IFNA1P01562 189 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 SPART-AS1P0CW21 52 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 BCL2P10415 239 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 MEF2BQ02080 365 aaPredicted RBP4.76□□□□□ -1.65
SCN9A-206ENST00000472119 TMEM183BQ1AE95 376 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 C12orf74Q32Q52 190 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 SMUG1Q53HV7 270 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 Q6AWC8 147 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms