RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 GAGE12IP0CL82 117 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 C11orf21Q9P2W6 132 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 APLNQ9ULZ1 77 aa13.96□□□□□ -0.17
HDAC7-220ENST00000471235 MUC4Q99102 2169 aa13.96□□□□□ -0.18
HDAC7-220ENST00000471235 LTAP01374 205 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 TYMSP04818 313 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 TCTAP57738 103 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 LINC00476Q8WZB0 136 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 ZC2HC1AQ96GY0 325 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 MDFICQ9P1T7 246 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 NACAE9PAV3 2078 aa13.95□□□□□ -0.18
HDAC7-220ENST00000471235 TRGV1A0A0A0MS02 117 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 SPINK4O60575 86 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 IFNA1P01562 189 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 ATP5G1P05496 136 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 C11orf52Q96A22 123 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 SDF2L1Q9HCN8 221 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 ZFP30Q9Y2G7 519 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 RYR2Q92736 4967 aa13.94□□□□□ -0.18
HDAC7-220ENST00000471235 IGHV3-16A0A0C4DH30 117 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 GNRH2O43555 120 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 BCL2P10415 239 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 BLOC1S1P78537 153 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 COX8CQ7Z4L0 72 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 KCNS1Q96KK3 526 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 TXNDC17Q9BRA2 123 aa13.93□□□□□ -0.18
HDAC7-220ENST00000471235 MRPL16Q9NX20 251 aaKnown RBP13.93□□□□□ -0.18
HDAC7-220ENST00000471235 S100A9P06702 114 aaKnown RBP13.92□□□□□ -0.18
HDAC7-220ENST00000471235 MEF2BQ02080 365 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-220ENST00000471235 FAM210BQ96KR6 192 aa13.92□□□□□ -0.18
HDAC7-220ENST00000471235 RYR3Q15413 4870 aa13.91□□□□□ -0.18
HDAC7-220ENST00000471235 F5H768 121 aa13.91□□□□□ -0.18
HDAC7-220ENST00000471235 TMEM88Q6PEY1 159 aa13.91□□□□□ -0.18
HDAC7-220ENST00000471235 NHLRC2Q8NBF2 726 aa13.91□□□□□ -0.18
HDAC7-220ENST00000471235 NDUFAF3Q9BU61 184 aa13.91□□□□□ -0.18
HDAC7-220ENST00000471235 CRIP1P50238 77 aa13.9□□□□□ -0.18
HDAC7-220ENST00000471235 LGALS9BQ3B8N2 356 aa13.9□□□□□ -0.18
HDAC7-220ENST00000471235 C18orf15Q96N68 181 aa13.9□□□□□ -0.18
HDAC7-220ENST00000471235 SPXQ9BT56 116 aa13.9□□□□□ -0.18
HDAC7-220ENST00000471235 DERL1Q9BUN8 251 aa13.9□□□□□ -0.18
HDAC7-220ENST00000471235 VAX2Q9UIW0 290 aa13.9□□□□□ -0.18
HDAC7-220ENST00000471235 TRGV2A0A075B6R0 118 aa13.89□□□□□ -0.19
HDAC7-220ENST00000471235 FABP5P3A8MUU1 101 aa13.89□□□□□ -0.19
HDAC7-220ENST00000471235 SH2D1AO60880 128 aa13.89□□□□□ -0.19
HDAC7-220ENST00000471235 RPL35P42766 123 aaKnown RBP13.89□□□□□ -0.19
HDAC7-220ENST00000471235 LYPD6BQ8NI32 183 aa13.89□□□□□ -0.19
HDAC7-220ENST00000471235 IGKV3D-20A0A0C4DH25 116 aa13.88□□□□□ -0.19
HDAC7-220ENST00000471235 PDE6DO43924 150 aa13.88□□□□□ -0.19
HDAC7-220ENST00000471235 LY6G6CO95867 125 aa13.88□□□□□ -0.19
HDAC7-220ENST00000471235 HOXA5P20719 270 aa13.88□□□□□ -0.19
HDAC7-220ENST00000471235 TAGLN2P37802 199 aaKnown RBP13.88□□□□□ -0.19
HDAC7-220ENST00000471235 ZNF674Q2M3X9 581 aa13.88□□□□□ -0.19
HDAC7-220ENST00000471235 FAM162BQ5T6X4 162 aa13.88□□□□□ -0.19
HDAC7-220ENST00000471235 LGALS9CQ6DKI2 356 aa13.87□□□□□ -0.19
HDAC7-220ENST00000471235 BAGE2Q86Y30 109 aa13.87□□□□□ -0.19
HDAC7-220ENST00000471235 MLST8Q9BVC4 326 aa13.87□□□□□ -0.19
HDAC7-220ENST00000471235 HYDINQ4G0P3 5121 aa13.86□□□□□ -0.19
HDAC7-220ENST00000471235 M0R2P5 195 aa13.86□□□□□ -0.19
HDAC7-220ENST00000471235 CENPWQ5EE01 88 aa13.86□□□□□ -0.19
HDAC7-220ENST00000471235 C9orf85Q96MD7 179 aa13.86□□□□□ -0.19
HDAC7-220ENST00000471235 B4DEV8 164 aa13.85□□□□□ -0.19
HDAC7-220ENST00000471235 M0R036 132 aa13.85□□□□□ -0.19
HDAC7-220ENST00000471235 RASL10AQ92737 203 aa13.85□□□□□ -0.19
HDAC7-220ENST00000471235 KRBOX1C9JBD0 128 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 IGHV3-53P01767 116 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 ORM1P02763 201 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 RNASE3P12724 160 aaKnown RBP13.84□□□□□ -0.19
HDAC7-220ENST00000471235 OR5I1Q13606 314 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 LINC01559Q495D7 138 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 TEX261Q6UWH6 196 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 C15orf53Q8NAA6 179 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 MED9Q9NWA0 146 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 VPS13DQ5THJ4 4388 aa13.84□□□□□ -0.19
HDAC7-220ENST00000471235 RAB19A4D1S5 217 aa13.83□□□□□ -0.2
HDAC7-220ENST00000471235 RBFOX3A6NFN3 312 aa13.83□□□□□ -0.2
HDAC7-220ENST00000471235 ASIPP42127 132 aa13.83□□□□□ -0.2
HDAC7-220ENST00000471235 ZNF506Q5JVG8 444 aa13.83□□□□□ -0.2
HDAC7-220ENST00000471235 TRAV26-1A0A087WT03 109 aa13.82□□□□□ -0.2
HDAC7-220ENST00000471235 IGLV2-8P01709 118 aa13.82□□□□□ -0.2
HDAC7-220ENST00000471235 PCNPQ8WW12 178 aaKnown RBP13.82□□□□□ -0.2
HDAC7-220ENST00000471235 TRBV20OR9-2A0A075B6H5 130 aa13.81□□□□□ -0.2
HDAC7-220ENST00000471235 A0A0J9YY99 117 aa13.81□□□□□ -0.2
HDAC7-220ENST00000471235 TOR2AQ5JU69 321 aa13.81□□□□□ -0.2
HDAC7-220ENST00000471235 DNLZQ5SXM8 178 aa13.81□□□□□ -0.2
HDAC7-220ENST00000471235 PRR27Q6MZM9 219 aa13.81□□□□□ -0.2
HDAC7-220ENST00000471235 POM121L12Q8N7R1 296 aa13.81□□□□□ -0.2
HDAC7-220ENST00000471235 TMSB15BA0A087X1C1 80 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 TRAV4A0A0B4J268 109 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 GRIFINA4D1Z8 144 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 H3BVH4 76 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 NUDT3O95989 172 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 SFTA3P0C7M3 94 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
HDAC7-220ENST00000471235 GNG4P50150 75 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 ZNF575Q86XF7 245 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 ZNF479Q96JC4 524 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 IL36BQ9NZH7 164 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 DNAH6Q9C0G6 4158 aa13.8□□□□□ -0.2
HDAC7-220ENST00000471235 PGPEP1LA6NFU8 196 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 C9JCJ5 164 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms