RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 POU2AF1Q16633 256 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 DYNAPQ8N1N2 210 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 GAGE12JA6NER3 117 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 GAGE7O76087 117 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 TNFRSF6BO95407 300 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 GAGE4Q13068 117 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 FAM104BQ5XKR9 115 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 FAM231DQ6ZW35 169 aa8.4□□□□□ -1.06
CHD3-208ENST00000470531 H3BMG7 143 aa8.4□□□□□ -1.07
CHD3-208ENST00000470531 CRYGCP07315 174 aa8.4□□□□□ -1.07
CHD3-208ENST00000470531 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.07
CHD3-208ENST00000470531 MRPL35Q9NZE8 188 aaKnown RBP8.4□□□□□ -1.07
CHD3-208ENST00000470531 K7EIM0 57 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 IGKCP01834 107 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 KLF5Q13887 457 aaPredicted RBP8.39□□□□□ -1.07
CHD3-208ENST00000470531 WFDC2Q14508 124 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 OR10J6PQ8NGY7 276 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 PRR25Q96S07 402 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
CHD3-208ENST00000470531 ATP6V0E1O15342 81 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
CHD3-208ENST00000470531 ZNF56Q15929 161 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 TTC9CQ8N5M4 171 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 FAM110AQ9BQ89 295 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 AGRNO00468 2067 aa8.39□□□□□ -1.07
CHD3-208ENST00000470531 IGKV3OR2-268A0A0C4DH90 116 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 PVRIGQ6DKI7 326 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 SNCGO76070 127 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 HIST2H2BDQ6DRA6 164 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 SIGLEC15Q6ZMC9 328 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 COX8AP10176 69 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 SAA4P35542 130 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 RASL11AQ6T310 242 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 BPESC1Q9GZL8 116 aa8.38□□□□□ -1.07
CHD3-208ENST00000470531 SHISA9B4DS77 424 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 FNDC10F2Z333 226 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 DPM2O94777 84 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 CRIP1P50238 77 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 THAP8Q8NA92 274 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 A0A1B0GXF2 115 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 TEX22C9J3V5 150 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 FXYD2P54710 66 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 FCN3O75636 299 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 CD7P09564 240 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 DTX2Q86UW9 622 aa8.37□□□□□ -1.07
CHD3-208ENST00000470531 ZNF815PA8K554 130 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 NUP37Q8NFH4 326 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 CFHR4Q92496 578 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 TRAV12-3A0A0B4J271 114 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 H3BRM9 83 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 I3L2K1 104 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 HAX1O00165 279 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 TNRC18O15417 2968 aaPredicted RBP8.36□□□□□ -1.07
CHD3-208ENST00000470531 IGF1P05019 195 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 RAX2Q96IS3 184 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 TRAV12-2A0A075B6T6 113 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 TMEM30BQ3MIR4 351 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 MS4A6AQ9H2W1 248 aa8.36□□□□□ -1.07
CHD3-208ENST00000470531 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
CHD3-208ENST00000470531 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
CHD3-208ENST00000470531 DOPEY1Q5JWR5 2465 aa8.35□□□□□ -1.07
CHD3-208ENST00000470531 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
CHD3-208ENST00000470531 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
CHD3-208ENST00000470531 KLHL30-AS1Q8NEE0 82 aa8.35□□□□□ -1.07
CHD3-208ENST00000470531 SPAG8Q99932 426 aaPredicted RBP8.35□□□□□ -1.07
CHD3-208ENST00000470531 C7orf69Q9H7B7 122 aa8.35□□□□□ -1.07
CHD3-208ENST00000470531 ADARB2-AS1A8MUL3 147 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 H3BRN7 92 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 FAM159AQ6UWV7 190 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 GNRH2O43555 120 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 EEF1AKMT3Q96AZ1 226 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 RPL39LQ96EH5 51 aaKnown RBP8.34□□□□□ -1.07
CHD3-208ENST00000470531 IGKV2D-26A0A0A0MRZ7 120 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 AGPAT4-IT1Q9H0P7 198 aa8.34□□□□□ -1.07
CHD3-208ENST00000470531 C19orf71A6NCJ1 209 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 Q6AWC8 147 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 ZNF492Q9P255 531 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 ERG28Q9UKR5 140 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 TNFRSF18Q9Y5U5 241 aa8.33□□□□□ -1.08
CHD3-208ENST00000470531 ZNF462Q96JM2 2506 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms