RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 FABP5P3A8MUU1 101 aa8.5□□□□□ -1.05
VPS13D-204ENST00000469054 DEFB130BP0DP73 79 aa8.5□□□□□ -1.05
VPS13D-204ENST00000469054 DEFB130AP0DP74 79 aa8.5□□□□□ -1.05
VPS13D-204ENST00000469054 RPL35P42766 123 aaKnown RBP8.5□□□□□ -1.05
VPS13D-204ENST00000469054 TCL1AP56279 114 aa8.5□□□□□ -1.05
VPS13D-204ENST00000469054 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
VPS13D-204ENST00000469054 BAGE2Q86Y30 109 aa8.5□□□□□ -1.05
VPS13D-204ENST00000469054 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
VPS13D-204ENST00000469054 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 GNRH2O43555 120 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 CRIP1P50238 77 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 ZNF415Q09FC8 603 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 LINC00612Q8N6U2 182 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
VPS13D-204ENST00000469054 ZC2HC1AQ96GY0 325 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 DERL1Q9BUN8 251 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 C11orf21Q9P2W6 132 aa8.49□□□□□ -1.05
VPS13D-204ENST00000469054 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-204ENST00000469054 DEFB131BA0A096LNP1 70 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 TYMSP04818 313 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 ZNF674Q2M3X9 581 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 FAM162BQ5T6X4 162 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 NHLRC2Q8NBF2 726 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 FAM210AQ96ND0 272 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 MLST8Q9BVC4 326 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 SDF2L1Q9HCN8 221 aa8.48□□□□□ -1.05
VPS13D-204ENST00000469054 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 IGKV3D-20A0A0C4DH25 116 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 IGHV3-16A0A0C4DH30 117 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 SPINK4O60575 86 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 TOR2AQ5JU69 321 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 Q6ZTI0 123 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 SPXQ9BT56 116 aa8.47□□□□□ -1.05
VPS13D-204ENST00000469054 EIF5A2Q9GZV4 153 aaKnown RBP8.47□□□□□ -1.05
VPS13D-204ENST00000469054 TRGV1A0A0A0MS02 117 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 GAGE12BA1L429 117 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 SH2D1AO60880 128 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
VPS13D-204ENST00000469054 GAGE7O76087 117 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 ORM1P02763 201 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 GAGE12FP0CL80 117 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 GAGE12GP0CL81 117 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 GAGE12IP0CL82 117 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 LGALS9BQ3B8N2 356 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 CENPWQ5EE01 88 aa8.46□□□□□ -1.06
VPS13D-204ENST00000469054 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
VPS13D-204ENST00000469054 IGLL5B9A064 214 aa8.45□□□□□ -1.06
VPS13D-204ENST00000469054 ATP5G1P05496 136 aa8.45□□□□□ -1.06
VPS13D-204ENST00000469054 HTN3P15516 51 aa8.45□□□□□ -1.06
VPS13D-204ENST00000469054 GNG4P50150 75 aa8.45□□□□□ -1.06
VPS13D-204ENST00000469054 SMIM12Q96EX1 92 aa8.45□□□□□ -1.06
VPS13D-204ENST00000469054 C18orf15Q96N68 181 aa8.45□□□□□ -1.06
VPS13D-204ENST00000469054 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
VPS13D-204ENST00000469054 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 B4DEV8 164 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 KRBOX1C9JBD0 128 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 M0R036 132 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 PRR27Q6MZM9 219 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 RASL10AQ92737 203 aa8.44□□□□□ -1.06
VPS13D-204ENST00000469054 MRPL16Q9NX20 251 aaKnown RBP8.44□□□□□ -1.06
VPS13D-204ENST00000469054 CSMD3Q7Z407 3707 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 TRBV20OR9-2A0A075B6H5 130 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 A6NJY4 79 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 C9JCJ5 164 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 F5H768 121 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 M0R2P5 195 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 SRP19P09132 144 aaKnown RBP8.43□□□□□ -1.06
VPS13D-204ENST00000469054 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
VPS13D-204ENST00000469054 RNASE3P12724 160 aaKnown RBP8.43□□□□□ -1.06
VPS13D-204ENST00000469054 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
VPS13D-204ENST00000469054 ASIPP42127 132 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 TCTAP57738 103 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 RAB14P61106 215 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 IFITM2Q01629 132 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 FAM210BQ96KR6 192 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 PARLQ9H300 379 aa8.43□□□□□ -1.06
VPS13D-204ENST00000469054 IGHV4-4A0A075B6R2 117 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 PGPEP1LA6NFU8 196 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 CEBPGP53567 150 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 DNLZQ5SXM8 178 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 BIN3Q9NQY0 253 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 APLNQ9ULZ1 77 aa8.42□□□□□ -1.06
VPS13D-204ENST00000469054 TMSB15BA0A087X1C1 80 aa8.41□□□□□ -1.06
VPS13D-204ENST00000469054 GRIFINA4D1Z8 144 aa8.41□□□□□ -1.06
VPS13D-204ENST00000469054 RPL19P84098 196 aaKnown RBP8.41□□□□□ -1.06
VPS13D-204ENST00000469054 OR5I1Q13606 314 aa8.41□□□□□ -1.06
VPS13D-204ENST00000469054 PEA15Q15121 130 aa8.41□□□□□ -1.06
VPS13D-204ENST00000469054 OCC1Q8TAD7 63 aa8.41□□□□□ -1.06
VPS13D-204ENST00000469054 DAZAP1Q96EP5 407 aaKnown RBP8.41□□□□□ -1.06
VPS13D-204ENST00000469054 NDUFAF3Q9BU61 184 aa8.41□□□□□ -1.06
VPS13D-204ENST00000469054 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms