RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SERTM2A0A1B0GWG4 89 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 A0A1W2PPQ1 181 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 H3BTX0 84 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 PEX7O00628 323 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 NDUFB4O95168 129 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 SNAPINO95295 136 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 PNRC1Q12796 327 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 ARL6IP6Q8N6S5 226 aa10.23□□□□□ -0.77
HMGXB4-206ENST00000466438 H3BMM0 161 aa10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 SLC17A3O00476 420 aa10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 NRN1Q9NPD7 142 aa10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 EPDR1Q9UM22 224 aa10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 RPH3ALQ9UNE2 315 aa10.22□□□□□ -0.77
HMGXB4-206ENST00000466438 TCRAP04437 139 aa10.21□□□□□ -0.77
HMGXB4-206ENST00000466438 UBE2G1P62253 170 aa10.21□□□□□ -0.77
HMGXB4-206ENST00000466438 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.77
HMGXB4-206ENST00000466438 TVP23CQ96ET8 276 aa10.21□□□□□ -0.77
HMGXB4-206ENST00000466438 FMC1Q96HJ9 113 aa10.21□□□□□ -0.77
HMGXB4-206ENST00000466438 C16orf92Q96LL3 132 aa10.21□□□□□ -0.77
HMGXB4-206ENST00000466438 FBLL1A6NHQ2 334 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-206ENST00000466438 C9JCJ5 164 aa10.2□□□□□ -0.78
HMGXB4-206ENST00000466438 RPL35P42766 123 aaKnown RBP10.2□□□□□ -0.78
HMGXB4-206ENST00000466438 TAS2R60P59551 318 aa10.2□□□□□ -0.78
HMGXB4-206ENST00000466438 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
HMGXB4-206ENST00000466438 M0R036 132 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 ISLRO14498 428 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 ID1P41134 155 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 GNG4P50150 75 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 GNG5P63218 68 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 TMEM75Q8N9X5 138 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 DERL1Q9BUN8 251 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 LY96Q9Y6Y9 160 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
HMGXB4-206ENST00000466438 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 B4DEV8 164 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 DIRC3C9JPN6 131 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 ERVFC1-1P60608 527 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 SNRPD3P62318 126 aaKnown RBP10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 RHEBQ15382 184 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 TMEM183BQ1AE95 376 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 SMIM12Q96EX1 92 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 SDF2L1Q9HCN8 221 aa10.18□□□□□ -0.78
HMGXB4-206ENST00000466438 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 F5H768 121 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 LINC00315P59091 139 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 HAMPP81172 84 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 ADIRFQ15847 76 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 UPK3BQ9BT76 320 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
HMGXB4-206ENST00000466438 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 M0R3E3 92 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 SOCS3O14543 225 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 FXYD7P58549 80 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 PSG3Q16557 428 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 KLF12Q9Y4X4 402 aa10.16□□□□□ -0.78
HMGXB4-206ENST00000466438 TRAV8-2A0A0B4J237 113 aa10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 RPL23P62829 140 aaKnown RBP10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 Q86TA4 180 aa10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 ZNF738Q8NE65 137 aa10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 IGF2BP2-AS1Q96M15 143 aa10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 NDFIP1Q9BT67 221 aa10.15□□□□□ -0.78
HMGXB4-206ENST00000466438 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 IGKV3-20P01619 116 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 FLI1Q01543 452 aaPredicted RBP10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 LINC01551Q86U37 167 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 BAGE2Q86Y30 109 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 LRP1Q07954 4544 aaKnown RBP10.14□□□□□ -0.79
HMGXB4-206ENST00000466438 TRBV20OR9-2A0A075B6H5 130 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 TRAV34A0A0B4J273 112 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 PPP1R2P9O14990 202 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 LTAP01374 205 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 MT-ND4LP03901 98 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 DEFB130BP0DP73 79 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 DEFB130AP0DP74 79 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 GCSHP23434 173 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 OR10J6PQ8NGY7 276 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
HMGXB4-206ENST00000466438 IGKV2-40A0A087WW87 121 aaPredicted RBP10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 A0A087WWC5 75 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms