RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 KCNS1Q96KK3 526 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
SQSTM1-205ENST00000464493 IGHV4-4A0A075B6R2 117 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 TRGV1A0A0A0MS02 117 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 LCE6AA0A183 80 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 FABP5P3A8MUU1 101 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 SPINK4O60575 86 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 LTAP01374 205 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 ATP5G1P05496 136 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 Q6ZTI0 123 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 COX8CQ7Z4L0 72 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 SDF2L1Q9HCN8 221 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 APLNQ9ULZ1 77 aa10.26□□□□□ -0.77
SQSTM1-205ENST00000464493 TYMSP04818 313 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 BCL2P10415 239 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 TAGLN2P37802 199 aaKnown RBP10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 LGALS9BQ3B8N2 356 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 ZC2HC1AQ96GY0 325 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 VAX2Q9UIW0 290 aa10.25□□□□□ -0.77
SQSTM1-205ENST00000464493 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 F5H768 121 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 PDE6DO43924 150 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 CRIP1P50238 77 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 BAGE2Q86Y30 109 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 SPXQ9BT56 116 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
SQSTM1-205ENST00000464493 SACSQ9NZJ4 4579 aa10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 TRGV2A0A075B6R0 118 aa10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 TMEM88Q6PEY1 159 aa10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 C18orf15Q96N68 181 aa10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 MRPL16Q9NX20 251 aaKnown RBP10.23□□□□□ -0.77
SQSTM1-205ENST00000464493 LY6G6CO95867 125 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 ORM1P02763 201 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 ZNF674Q2M3X9 581 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 TEX261Q6UWH6 196 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 NHLRC2Q8NBF2 726 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 LINC00476Q8WZB0 136 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 DERL1Q9BUN8 251 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 MLST8Q9BVC4 326 aa10.22□□□□□ -0.77
SQSTM1-205ENST00000464493 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 M0R2P5 195 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 SH2D1AO60880 128 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 OR5I1Q13606 314 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 RASL10AQ92737 203 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
SQSTM1-205ENST00000464493 B4DEV8 164 aa10.2□□□□□ -0.78
SQSTM1-205ENST00000464493 LGALS9CQ6DKI2 356 aa10.2□□□□□ -0.78
SQSTM1-205ENST00000464493 ALMS1Q8TCU4 4167 aa10.2□□□□□ -0.78
SQSTM1-205ENST00000464493 DNAH1Q9P2D7 4330 aa10.19□□□□□ -0.78
SQSTM1-205ENST00000464493 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
SQSTM1-205ENST00000464493 M0R036 132 aa10.19□□□□□ -0.78
SQSTM1-205ENST00000464493 HOXA5P20719 270 aa10.19□□□□□ -0.78
SQSTM1-205ENST00000464493 MUC4Q99102 2169 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 RAB19A4D1S5 217 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 IGHV3-53P01767 116 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 ASIPP42127 132 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 GNG4P50150 75 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 CENPWQ5EE01 88 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 ZNF506Q5JVG8 444 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 C9orf85Q96MD7 179 aa10.18□□□□□ -0.78
SQSTM1-205ENST00000464493 TRAV26-1A0A087WT03 109 aa10.17□□□□□ -0.78
SQSTM1-205ENST00000464493 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
SQSTM1-205ENST00000464493 ZNF876PQ49A33 203 aa10.17□□□□□ -0.78
SQSTM1-205ENST00000464493 PRR27Q6MZM9 219 aa10.17□□□□□ -0.78
SQSTM1-205ENST00000464493 EIF5A2Q9GZV4 153 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-205ENST00000464493 TMSB15BA0A087X1C1 80 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 A0A0J9YY99 117 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 C9JCJ5 164 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 NUDT3O95989 172 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 IGLV2-8P01709 118 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 P0DMU3 169 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 MGST1P10620 155 aaKnown RBP10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 TOR2AQ5JU69 321 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 DNLZQ5SXM8 178 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 ZNF575Q86XF7 245 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 PTH2Q96A98 100 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 SMIM12Q96EX1 92 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 FAM210AQ96ND0 272 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 IL36BQ9NZH7 164 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 RYR3Q15413 4870 aa10.16□□□□□ -0.78
SQSTM1-205ENST00000464493 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.78
SQSTM1-205ENST00000464493 GRIFINA4D1Z8 144 aa10.15□□□□□ -0.78
SQSTM1-205ENST00000464493 TMEM250H0YL14 139 aa10.15□□□□□ -0.78
SQSTM1-205ENST00000464493 POM121L12Q8N7R1 296 aa10.15□□□□□ -0.78
SQSTM1-205ENST00000464493 OR4C5Q8NGB2 326 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms