RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PGPA6NDG6 321 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 PGPEP1LA6NFU8 196 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 CXorf1O96002 111 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 RBMY1A1P0DJD3 496 aaKnown RBP2.59□□□□□ -1.99
SCFD1-204ENST00000463622 RBMY1CP0DJD4 496 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 BCL2P10415 239 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 GALR1P47211 349 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 RAB5CP51148 216 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 DEFB131AP59861 70 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 GAGE5Q13069 117 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 GAGE6Q13070 117 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 RBMY1FQ15415 496 aaKnown RBP2.59□□□□□ -1.99
SCFD1-204ENST00000463622 PSMG4Q5JS54 123 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 ZNF506Q5JVG8 444 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 C1orf194Q5T5A4 169 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 ZC2HC1BQ5TFG8 222 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 EIF5AL1Q6IS14 154 aaKnown RBP2.59□□□□□ -1.99
SCFD1-204ENST00000463622 LINC00336Q6ZUF6 198 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 MARC2Q969Z3 335 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 LINC00052Q96N35 136 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 FAM210AQ96ND0 272 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 MUC4Q99102 2169 aa2.59□□□□□ -1.99
SCFD1-204ENST00000463622 RAB19A4D1S5 217 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 LINC00862A6NCI5 91 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 ISLRO14498 428 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 SCGB2A1O75556 95 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 PRM2P04554 102 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 SLC25A5P05141 298 aaKnown RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 CD5P06127 495 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 SRP19P09132 144 aaKnown RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 GIG44P09565 113 aaPredicted RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 FXYD7P58549 80 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 TAS2R45P59539 299 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 PSG3Q16557 428 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 GUK1Q16774 197 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 CST9LP1Q5W188 147 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 LCN12Q6JVE5 192 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 AMTNQ6UX39 209 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 GOLT1AQ6ZVE7 132 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 COMMD7Q86VX2 200 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 DEFB125Q8N687 156 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 NHLRC2Q8NBF2 726 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 SPAG8Q99932 426 aaPredicted RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 OVOL2Q9BRP0 275 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 OTORQ9NRC9 128 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 KLK5Q9Y337 293 aaPredicted RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 FAT2Q9NYQ8 4349 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 A0A0J9YX75 114 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 A0A1W2PRE2 83 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 HELTA6NFD8 242 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 RBFOX3A6NFN3 312 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 C11orf94C9JXX5 98 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 F6UZH7 168 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 J3KRW8 73 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 DNASE2O00115 360 aaPredicted RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 ZNF253O75346 499 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 IGLV2-8P01709 118 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 HBE1P02100 147 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 TCRAP04437 139 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 CT45A10P0DMU9 189 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 PSMB3P49720 205 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 ZNF80P51504 273 aaPredicted RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 CNN1P51911 297 aaKnown RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 ACTL10Q5JWF8 245 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 RBPMS2Q6ZRY4 209 aaKnown RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 GTSCR1Q86UQ5 136 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 CYB561D1Q8N8Q1 229 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 ZNF738Q8NE65 137 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 C11orf52Q96A22 123 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 RPUSD4Q96CM3 377 aaKnown RBP2.58□□□□□ -2
SCFD1-204ENST00000463622 IGF2BP2-AS1Q96M15 143 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 AGPAT4-IT1Q9H0P7 198 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 SLC35B3Q9H1N7 401 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 TMEM167BQ9NRX6 74 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 EPDR1Q9UM22 224 aa2.58□□□□□ -2
SCFD1-204ENST00000463622 HSPG2P98160 4391 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 DNAH2Q9P225 4427 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 TRAV25A0A0B4J276 109 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 A8MTW9 85 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 H3BMM0 161 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 K7EN84 100 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 M0R2Z0 102 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 PEX7O00628 323 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
SCFD1-204ENST00000463622 RPL35AP18077 110 aaKnown RBP2.57□□□□□ -2
SCFD1-204ENST00000463622 CRIP1P50238 77 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 PPT1P50897 306 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 CEBPGP53567 150 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
SCFD1-204ENST00000463622 HIST1H1AQ02539 215 aaPredicted RBP2.57□□□□□ -2
SCFD1-204ENST00000463622 BTN1A1Q13410 526 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 PDE6HQ13956 83 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 Q86TA4 180 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 ZFAND2AQ8N6M9 145 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 TMEM75Q8N9X5 138 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 C5orf17Q8NAS9 161 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 OR8A1Q8NGG7 326 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 OR2K2Q8NGT1 345 aa2.57□□□□□ -2
SCFD1-204ENST00000463622 NARS2Q96I59 477 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms