RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TRAV34A0A0B4J273 112 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 GCGP01275 180 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 C1QBP02746 253 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 PPT1P50897 306 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 SMUG1Q53HV7 270 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 SFT2D1Q8WV19 159 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 SPXQ9BT56 116 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 ARL2-SNX15V9GYD0 113 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 DNAH10Q8IVF4 4471 aa13.16□□□□□ -0.3
COL9A3-203ENST00000462700 hCG_2014768A0A024R1R8 64 aa13.15□□□□□ -0.3
COL9A3-203ENST00000462700 A0A0J9YY99 117 aa13.15□□□□□ -0.3
COL9A3-203ENST00000462700 GNRH2O43555 120 aa13.15□□□□□ -0.3
COL9A3-203ENST00000462700 TYMSP04818 313 aa13.15□□□□□ -0.3
COL9A3-203ENST00000462700 KCNS1Q96KK3 526 aa13.15□□□□□ -0.3
COL9A3-203ENST00000462700 SDF2L1Q9HCN8 221 aa13.15□□□□□ -0.3
COL9A3-203ENST00000462700 IGHV3-16A0A0C4DH30 117 aa13.14□□□□□ -0.31
COL9A3-203ENST00000462700 H3BNG1 76 aa13.14□□□□□ -0.31
COL9A3-203ENST00000462700 PFN1P07737 140 aaKnown RBP13.14□□□□□ -0.31
COL9A3-203ENST00000462700 Q86TA4 180 aa13.14□□□□□ -0.31
COL9A3-203ENST00000462700 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
COL9A3-203ENST00000462700 TCEAL7Q9BRU2 100 aa13.14□□□□□ -0.31
COL9A3-203ENST00000462700 C11orf21Q9P2W6 132 aa13.14□□□□□ -0.31
COL9A3-203ENST00000462700 A0A1B0GV50 99 aa13.13□□□□□ -0.31
COL9A3-203ENST00000462700 PAGE4O60829 102 aa13.13□□□□□ -0.31
COL9A3-203ENST00000462700 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
COL9A3-203ENST00000462700 H2AFB1P0C5Y9 115 aa13.13□□□□□ -0.31
COL9A3-203ENST00000462700 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
COL9A3-203ENST00000462700 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
COL9A3-203ENST00000462700 RASL10AQ92737 203 aa13.12□□□□□ -0.31
COL9A3-203ENST00000462700 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
COL9A3-203ENST00000462700 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
COL9A3-203ENST00000462700 FMC1Q96HJ9 113 aa13.11□□□□□ -0.31
COL9A3-203ENST00000462700 IGLV2-18A0A075B6J9 118 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 M0R2N4 97 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 M0R2P5 195 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 CCL18P55774 89 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 UBE2G1P62253 170 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 LINC00588Q9Y4M8 146 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 DNAH2Q9P225 4427 aa13.1□□□□□ -0.31
COL9A3-203ENST00000462700 RAB5CP51148 216 aa13.09□□□□□ -0.31
COL9A3-203ENST00000462700 FHL2Q14192 279 aa13.09□□□□□ -0.31
COL9A3-203ENST00000462700 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
COL9A3-203ENST00000462700 ZFP30Q9Y2G7 519 aa13.09□□□□□ -0.31
COL9A3-203ENST00000462700 A0A096LPF7 62 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 AKR1C3P42330 323 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 SULT1A2P50226 295 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 SLAQ13239 276 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 ZNF479Q96JC4 524 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 PRO0255Q9UI72 69 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 BIRC6Q9NR09 4857 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 FRAS1Q86XX4 4008 aa13.08□□□□□ -0.32
COL9A3-203ENST00000462700 FABP5P3A8MUU1 101 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 PAX4O43316 350 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 SFTA3P0C7M3 94 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 CRYBA4P53673 196 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 Q6ZR54 194 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 C9orf62Q8N4C0 152 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 ZC2HC1AQ96GY0 325 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 HHLA3Q9XRX5 114 aa13.07□□□□□ -0.32
COL9A3-203ENST00000462700 TRAV1-1A0A0B4J248 108 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 TRAV4A0A0B4J268 109 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 IGKV3D-20A0A0C4DH25 116 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 TRGV4A0A0C4DH28 118 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 SCO2A0A1W2PP80 73 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 LTAP01374 205 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 CRIP1P50238 77 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 CCL20P78556 96 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 C9orf85Q96MD7 179 aa13.06□□□□□ -0.32
COL9A3-203ENST00000462700 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
COL9A3-203ENST00000462700 ESRGQ1W209 222 aa13.05□□□□□ -0.32
COL9A3-203ENST00000462700 OR4C5Q8NGB2 326 aa13.05□□□□□ -0.32
COL9A3-203ENST00000462700 MANBALQ9NQG1 85 aa13.05□□□□□ -0.32
COL9A3-203ENST00000462700 ICOSQ9Y6W8 199 aa13.05□□□□□ -0.32
COL9A3-203ENST00000462700 C9JCJ5 164 aa13.04□□□□□ -0.32
COL9A3-203ENST00000462700 SH2D1AO60880 128 aa13.04□□□□□ -0.32
COL9A3-203ENST00000462700 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
COL9A3-203ENST00000462700 GNG13Q9P2W3 67 aa13.04□□□□□ -0.32
COL9A3-203ENST00000462700 NACAE9PAV3 2078 aa13.04□□□□□ -0.32
COL9A3-203ENST00000462700 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
COL9A3-203ENST00000462700 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
COL9A3-203ENST00000462700 ORM1P02763 201 aa13.03□□□□□ -0.32
COL9A3-203ENST00000462700 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
COL9A3-203ENST00000462700 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
COL9A3-203ENST00000462700 B4DEV8 164 aa13.02□□□□□ -0.33
COL9A3-203ENST00000462700 S100A4P26447 101 aaKnown RBP13.02□□□□□ -0.33
COL9A3-203ENST00000462700 ASIPP42127 132 aa13.02□□□□□ -0.33
COL9A3-203ENST00000462700 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.33
COL9A3-203ENST00000462700 PTH2Q96A98 100 aa13.02□□□□□ -0.33
COL9A3-203ENST00000462700 UPK3BQ9BT76 320 aa13.02□□□□□ -0.33
COL9A3-203ENST00000462700 MRPS16Q9Y3D3 137 aaKnown RBP13.02□□□□□ -0.33
COL9A3-203ENST00000462700 MUC4Q99102 2169 aa13.01□□□□□ -0.33
COL9A3-203ENST00000462700 PGPEP1LA6NFU8 196 aa13.01□□□□□ -0.33
COL9A3-203ENST00000462700 KRBOX1C9JBD0 128 aa13.01□□□□□ -0.33
COL9A3-203ENST00000462700 ZNF506Q5JVG8 444 aa13.01□□□□□ -0.33
COL9A3-203ENST00000462700 LINC00336Q6ZUF6 198 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms