RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 SLAQ13239 276 aa8.14□□□□□ -1.11
PDGFB-204ENST00000455790 MRPL23Q16540 153 aaKnown RBP8.14□□□□□ -1.11
PDGFB-204ENST00000455790 SPXQ9BT56 116 aa8.14□□□□□ -1.11
PDGFB-204ENST00000455790 MED28Q9H204 178 aa8.14□□□□□ -1.11
PDGFB-204ENST00000455790 TREM1Q9NP99 234 aa8.14□□□□□ -1.11
PDGFB-204ENST00000455790 C11orf21Q9P2W6 132 aa8.14□□□□□ -1.11
PDGFB-204ENST00000455790 TRAV4A0A0B4J268 109 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 GGTLC3B5MD39 225 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 BTF3P20290 206 aaKnown RBP8.13□□□□□ -1.11
PDGFB-204ENST00000455790 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDGFB-204ENST00000455790 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
PDGFB-204ENST00000455790 NEGR1Q7Z3B1 354 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 IQCF2Q8IXL9 164 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 ARL6IP6Q8N6S5 226 aa8.13□□□□□ -1.11
PDGFB-204ENST00000455790 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
PDGFB-204ENST00000455790 RNF222A6NCQ9 220 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 M0R2P5 195 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 IGLV2-11P01706 119 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 TCRAP04437 139 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 SRIP30626 198 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 TMEM75Q8N9X5 138 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 C5orf17Q8NAS9 161 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 SUN5Q8TC36 379 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 SDF2L1Q9HCN8 221 aa8.12□□□□□ -1.11
PDGFB-204ENST00000455790 GIPP09681 153 aaPredicted RBP8.11□□□□□ -1.11
PDGFB-204ENST00000455790 RPL7L1Q6DKI1 246 aaKnown RBP8.11□□□□□ -1.11
PDGFB-204ENST00000455790 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
PDGFB-204ENST00000455790 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
PDGFB-204ENST00000455790 OR4C5Q8NGB2 326 aa8.11□□□□□ -1.11
PDGFB-204ENST00000455790 PCNPQ8WW12 178 aaKnown RBP8.11□□□□□ -1.11
PDGFB-204ENST00000455790 ASB13Q8WXK3 278 aa8.11□□□□□ -1.11
PDGFB-204ENST00000455790 FXYD6-FXYD2A0A087WZ82 144 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 G3V3Q6 166 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 GCGP01275 180 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
PDGFB-204ENST00000455790 SUMO1P63165 101 aaKnown RBP8.1□□□□□ -1.11
PDGFB-204ENST00000455790 ZNF726P1Q15940 193 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 PSG8Q9UQ74 426 aa8.1□□□□□ -1.11
PDGFB-204ENST00000455790 SERTM2A0A1B0GWG4 89 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 C9JCJ5 164 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 CXorf1O96002 111 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 MBP02144 154 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 ORM1P02763 201 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 SERF2P84101 59 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 FLI1Q01543 452 aaPredicted RBP8.09□□□□□ -1.11
PDGFB-204ENST00000455790 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 CYB561D1Q8N8Q1 229 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 KCNS1Q96KK3 526 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 LINC00479Q96M42 142 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 TNFSF18Q9UNG2 199 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
PDGFB-204ENST00000455790 TRAV34A0A0B4J273 112 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 PFN1P07737 140 aaKnown RBP8.08□□□□□ -1.12
PDGFB-204ENST00000455790 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 OR2T35Q8NGX2 323 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 TXNDC17Q9BRA2 123 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 ACTR3CQ9C0K3 210 aaPredicted RBP8.08□□□□□ -1.12
PDGFB-204ENST00000455790 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
PDGFB-204ENST00000455790 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 FBLL1A6NHQ2 334 aaKnown RBP8.07□□□□□ -1.12
PDGFB-204ENST00000455790 K7EQM0 130 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 RNASE3P12724 160 aaKnown RBP8.07□□□□□ -1.12
PDGFB-204ENST00000455790 UBE2G2P60604 165 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 SMUG1Q53HV7 270 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 ZNF506Q5JVG8 444 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 SLC25A29Q8N8R3 303 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 NHLRC2Q8NBF2 726 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 INO80EQ8NBZ0 244 aaPredicted RBP8.07□□□□□ -1.12
PDGFB-204ENST00000455790 MSRB1Q9NZV6 116 aa8.07□□□□□ -1.12
PDGFB-204ENST00000455790 A0A087WTM6 91 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 BORCS7-ASMTA0A0B4J1R7 106 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 PGPEP1LA6NFU8 196 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 TAAR5O14804 337 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 RS1O15537 224 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 FGF8P55075 233 aaPredicted RBP8.06□□□□□ -1.12
PDGFB-204ENST00000455790 ERVFC1-1P60608 527 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 ARL2-SNX15V9GYD0 113 aa8.06□□□□□ -1.12
PDGFB-204ENST00000455790 IGKV3D-20A0A0C4DH25 116 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 CTXND1A0A1B0GTU2 59 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 A0A1W2PRE2 83 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 CRYGDP07320 174 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 EVI2AP22794 236 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 PPT1P50897 306 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 ZFP69Q49AA0 526 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 Q86TA4 180 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 Q8N1X5 172 aa8.05□□□□□ -1.12
PDGFB-204ENST00000455790 TRAV9-2A0A087WT02 112 aa8.04□□□□□ -1.12
PDGFB-204ENST00000455790 FAM74A7A6NL05 159 aa8.04□□□□□ -1.12
PDGFB-204ENST00000455790 SMLR1H3BR10 107 aa8.04□□□□□ -1.12
PDGFB-204ENST00000455790 PEX7O00628 323 aa8.04□□□□□ -1.12
PDGFB-204ENST00000455790 ARPC5O15511 151 aa8.04□□□□□ -1.12
PDGFB-204ENST00000455790 IFNA7P01567 189 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms