RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 LYPD5Q6UWN5 251 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 C9orf47Q6ZRZ4 202 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 STX12Q86Y82 276 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 EIF4E3Q8N5X7 224 aaKnown RBP3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 ZFAND2AQ8N6M9 145 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 OR5C1Q8NGR4 320 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 Q8TAT8 98 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 ODF3Q96PU9 254 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 UPK3BQ9BT76 320 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 NPCDR1Q9BY65 106 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 OR51M1Q9H341 326 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 Q9H3A6 140 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 OR5AC2Q9NZP5 309 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 TMEM14CQ9P0S9 112 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 MDFICQ9P1T7 246 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF492Q9P255 531 aa3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 MRPS16Q9Y3D3 137 aaKnown RBP3.2□□□□□ -1.9
GTF3C3-208ENST00000455546 IGHV1OR15-1A0A075B7D0 117 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 A0A1W2PPQ1 181 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 GNRH2O43555 120 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 NXPH4O95158 308 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 CRISP2P16562 243 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 CRYBA4P53673 196 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 TTC32Q5I0X7 151 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 TMEM78Q5T7P6 136 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 WDR73Q6P4I2 378 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 PRR26Q8N8Z3 221 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF680Q8NEM1 530 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 FXYD5Q96DB9 178 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 MRPL53Q96EL3 112 aaKnown RBP3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 PHYHIPLQ96FC7 376 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF479Q96JC4 524 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 ST6GAL2Q96JF0 529 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 HYLS1Q96M11 299 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 LINC00467Q9BRT7 94 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 PAXXQ9BUH6 204 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 HHLA3Q9XRX5 114 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 PRELID1Q9Y255 219 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 RYR1P21817 5038 aa3.19□□□□□ -1.9
GTF3C3-208ENST00000455546 LRP1BQ9NZR2 4599 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 TRGV4A0A0C4DH28 118 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 LOC100131303A0A0U1RQF7 123 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 K7EQD1 137 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 OR7C2O60412 319 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 AMTP48728 403 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF138P52744 262 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 H2BFSP57053 126 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 IFITM3Q01628 133 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 PDE6HQ13956 83 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 MRPL23Q16540 153 aaKnown RBP3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 TMEM183BQ1AE95 376 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 NEGR1Q7Z3B1 354 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 WFDC10BQ8IUB3 73 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 TMEM183AQ8IXX5 376 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 SGK494Q96LW2 274 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 C18orf15Q96N68 181 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 CCDC32Q9BV29 185 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 MRPL32Q9BYC8 188 aaKnown RBP3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 SMIM3Q9BZL3 60 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 WDR61Q9GZS3 305 aaKnown RBP3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 SLC25A31Q9H0C2 315 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 PRO0255Q9UI72 69 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 NAGKQ9UJ70 344 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 RPH3ALQ9UNE2 315 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 ICOSQ9Y6W8 199 aa3.18□□□□□ -1.9
GTF3C3-208ENST00000455546 IGHV3-16A0A0C4DH30 117 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 PGPA6NDG6 321 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 INMT-MINDY4F8WBC2 141 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 HMGB3O15347 200 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 SMR3BP02814 79 aaPredicted RBP3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 NMBP08949 121 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 CSN1S1P47710 185 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 XGP55808 180 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 KRTAP10-1P60331 282 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 HAMPP81172 84 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF415Q09FC8 603 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 ASAH1Q13510 395 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 ZNF266Q14584 549 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 FFAR4Q5NUL3 377 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 IBA57Q5T440 356 aaKnown RBP3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 ENKURQ8TC29 256 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 PPP1R1CQ8WVI7 109 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 TMED6Q8WW62 240 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 RASL10AQ92737 203 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 NMES1Q9C002 83 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 WFDC1Q9HC57 220 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 NDUFA13Q9P0J0 144 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 MBD2Q9UBB5 411 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
GTF3C3-208ENST00000455546 FLG2Q5D862 2391 aaPredicted RBP3.16□□□□□ -1.9
GTF3C3-208ENST00000455546 A0A087WTM6 91 aa3.16□□□□□ -1.9
GTF3C3-208ENST00000455546 TRAV8-1A0A0A6YYK1 113 aa3.16□□□□□ -1.9
GTF3C3-208ENST00000455546 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
GTF3C3-208ENST00000455546 RBAKDNA6NC62 111 aa3.16□□□□□ -1.9
GTF3C3-208ENST00000455546 EPM2AB3EWF7 344 aa3.16□□□□□ -1.9
GTF3C3-208ENST00000455546 C17orf112F2Z3M2 114 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms