RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CCL24O00175 119 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 SERF1AO75920 110 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 RELQ04864 619 aaPredicted RBP3.6□□□□□ -1.83
RIF1-207ENST00000454583 TDRG1Q3Y452 100 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 CST9LP1Q5W188 147 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 KCNS1Q96KK3 526 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 C20orf144Q9BQM9 153 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 GAR1Q9NY12 217 aaKnown RBP3.6□□□□□ -1.83
RIF1-207ENST00000454583 PSG8Q9UQ74 426 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 RNF24Q9Y225 148 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
RIF1-207ENST00000454583 F8P00451 2351 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 XKRY2A2RUG3 117 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 OR7C2O60412 319 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 SLC25A24Q6NUK1 477 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 EBLN2Q6P2I7 272 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 ZNF705AQ6ZN79 300 aaPredicted RBP3.6□□□□□ -1.83
RIF1-207ENST00000454583 NRACQ8N912 160 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 ZNF418Q8TF45 676 aaPredicted RBP3.6□□□□□ -1.83
RIF1-207ENST00000454583 MS4A10Q96PG2 267 aa3.6□□□□□ -1.83
RIF1-207ENST00000454583 A0A0J9YX75 114 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 HIGD1CA8MV81 97 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 HLA-DQA1P01909 254 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 IL4P05112 153 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 MED14OSP0DP75 135 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 KCNIP4Q6PIL6 250 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 C18orf15Q96N68 181 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 A0A1W2PPQ1 181 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 ZNF705FA8MVS1 300 aaPredicted RBP3.59□□□□□ -1.83
RIF1-207ENST00000454583 ZNF705DP0CH99 300 aaPredicted RBP3.59□□□□□ -1.83
RIF1-207ENST00000454583 ZNF705BP0CI00 300 aaPredicted RBP3.59□□□□□ -1.83
RIF1-207ENST00000454583 CEBPGP53567 150 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 PSG9Q00887 426 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 BPIFA4PQ86YQ2 179 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 OR4F17Q8NGA8 305 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 THYN1Q9P016 225 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
RIF1-207ENST00000454583 M0R3E3 92 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 GAS8-AS1O95177 125 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 FABP1P07148 127 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 ORM2P19652 201 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 NDUFA6P56556 154 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 RBPMS2Q6ZRY4 209 aaKnown RBP3.59□□□□□ -1.84
RIF1-207ENST00000454583 TMEM61Q8N0U2 210 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 DUX3Q96PT4 197 aa3.59□□□□□ -1.84
RIF1-207ENST00000454583 A0A1B0GW15 77 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 SPRY2O43597 315 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 SH2D1AO60880 128 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 FGF6P10767 208 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 RAB4AP20338 218 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 RANP62826 216 aaKnown RBP3.58□□□□□ -1.84
RIF1-207ENST00000454583 PAFAH1B2P68402 229 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 CD300EQ496F6 205 aaPredicted RBP3.58□□□□□ -1.84
RIF1-207ENST00000454583 BAGE2Q86Y30 109 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 WFDC3Q8IUB2 231 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 AGPAT4-IT1Q9H0P7 198 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 C2CD3Q4AC94 2353 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 CNIH1O95406 144 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 IGHV3-11P01762 117 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 OR5AL1P0C617 328 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 HLA-DRB4P13762 266 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 LCN12Q6JVE5 192 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 RHPN1-AS1Q9BWJ2 59 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 UFC1Q9Y3C8 167 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 HLA-DRB4X5D2U9 266 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 AGRNO00468 2067 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 IGHV1-24A0A0C4DH33 117 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 RIPPLY3P57055 190 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 IQCF2Q8IXL9 164 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 RABAC1Q9UI14 185 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 X6R8D5 127 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 CSPG4Q6UVK1 2322 aa3.58□□□□□ -1.84
RIF1-207ENST00000454583 H3BMM0 161 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 ARMS2P0C7Q2 107 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 RNASE3P12724 160 aaKnown RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 LYZP61626 148 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 RPL32P62910 135 aaKnown RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 SLC35B1P78383 322 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 OR10D4PQ8NGN7 298 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 CHCHD1Q96BP2 118 aaKnown RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 C9orf85Q96MD7 179 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 GRIFINA4D1Z8 144 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 FABP4P15090 132 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 S100PP25815 95 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 HBBP68871 147 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 ZNF124Q15973 351 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 FAM106AQ4KMX7 169 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 C1orf158Q8N1D5 194 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 RNF182Q8N6D2 247 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 KLHL30-AS1Q8NEE0 82 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 SLC50A1Q9BRV3 221 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 HINT2Q9BX68 163 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 NRN1Q9NPD7 142 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 STAB1Q9NY15 2570 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 GNG7O60262 68 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 RPL7P18124 248 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms