RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 TM2D2Q9BX73 214 aa16.54■□□□□ 0.24
SKIDA1-201ENST00000444772 TRAV12-1A0A0B4J245 112 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 TRAV40A0A0B4J280 105 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 ORMDL2Q53FV1 153 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 SPCS1Q9Y6A9 102 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 TAL2Q16559 108 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 C20orf78Q9BR46 151 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 MED14OSP0DP75 135 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 SLC25A16P16260 332 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 TMEM219Q86XT9 240 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 C20orf173Q96LM9 149 aa16.53■□□□□ 0.24
SKIDA1-201ENST00000444772 PRR9Q5T870 116 aa16.52■□□□□ 0.24
SKIDA1-201ENST00000444772 SAMD5Q5TGI4 173 aa16.52■□□□□ 0.24
SKIDA1-201ENST00000444772 H3BUA1 57 aa16.52■□□□□ 0.23
SKIDA1-201ENST00000444772 FXYD2P54710 66 aa16.52■□□□□ 0.23
SKIDA1-201ENST00000444772 ZFAND2AQ8N6M9 145 aa16.52■□□□□ 0.23
SKIDA1-201ENST00000444772 IGF1P05019 195 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 COTL1Q14019 142 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 USMG5Q96IX5 58 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 IGHV1-69DA0A0B4J2H0 117 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 TRBV7-9A0A0J9YWB2 115 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 IGHV1-69P01742 117 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 CEND1Q8N111 149 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 DPH3P1Q9H4G8 78 aa16.51■□□□□ 0.23
SKIDA1-201ENST00000444772 SOCS3O14543 225 aa16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 Q6ZQT7 251 aa16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 NAA38Q9BRA0 125 aaKnown RBP16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 H7C1H1 209 aa16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 ASIPP42127 132 aa16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 TTTY13Q9BZ97 58 aa16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 MEGF9Q9H1U4 602 aa16.5■□□□□ 0.23
SKIDA1-201ENST00000444772 SUMO2P61956 95 aaKnown RBP16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 TM4SF20Q53R12 229 aa16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 GPHB5Q86YW7 130 aa16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 NBASA2RRP1 2371 aa16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 F8VRH5 84 aa16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 M0R381 172 aa16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 S100A4P26447 101 aaKnown RBP16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 NEGR1Q7Z3B1 354 aa16.49■□□□□ 0.23
SKIDA1-201ENST00000444772 PPP1R17O96001 155 aa16.48■□□□□ 0.23
SKIDA1-201ENST00000444772 TOMM6Q96B49 74 aa16.48■□□□□ 0.23
SKIDA1-201ENST00000444772 MED13LQ71F56 2210 aa16.48■□□□□ 0.23
SKIDA1-201ENST00000444772 UNQ9165/PRO28630Q6UXU0 137 aa16.47■□□□□ 0.23
SKIDA1-201ENST00000444772 APRG1Q8IVJ8 170 aa16.47■□□□□ 0.23
SKIDA1-201ENST00000444772 FAM19A4Q96LR4 140 aa16.47■□□□□ 0.23
SKIDA1-201ENST00000444772 PHLDA1Q8WV24 401 aaPredicted RBP16.47■□□□□ 0.23
SKIDA1-201ENST00000444772 LINC00527Q9UJ94 153 aa16.47■□□□□ 0.23
SKIDA1-201ENST00000444772 PHLDA3Q9Y5J5 127 aa16.47■□□□□ 0.23
SKIDA1-201ENST00000444772 RASL10AQ92737 203 aa16.46■□□□□ 0.23
SKIDA1-201ENST00000444772 SCGB3A1Q96QR1 104 aa16.46■□□□□ 0.23
SKIDA1-201ENST00000444772 CSMD1Q96PZ7 3565 aa16.46■□□□□ 0.22
SKIDA1-201ENST00000444772 LINC01619G3V211 115 aa16.45■□□□□ 0.22
SKIDA1-201ENST00000444772 G3V4G9 280 aa16.45■□□□□ 0.22
SKIDA1-201ENST00000444772 CACNA1AO00555 2505 aa16.45■□□□□ 0.22
SKIDA1-201ENST00000444772 RELNP78509 3460 aa16.45■□□□□ 0.22
SKIDA1-201ENST00000444772 SAP30O75446 220 aa16.44■□□□□ 0.22
SKIDA1-201ENST00000444772 IGHG2P01859 326 aa16.44■□□□□ 0.22
SKIDA1-201ENST00000444772 MAPKAPK5-AS1Q8N8E1 139 aa16.44■□□□□ 0.22
SKIDA1-201ENST00000444772 CHTOPQ9Y3Y2 248 aaKnown RBP16.44■□□□□ 0.22
SKIDA1-201ENST00000444772 CACNA1BQ00975 2339 aa16.44■□□□□ 0.22
SKIDA1-201ENST00000444772 TRBV12-3P01733 135 aa16.43■□□□□ 0.22
SKIDA1-201ENST00000444772 IGHV4-39P01824 125 aa16.43■□□□□ 0.22
SKIDA1-201ENST00000444772 ANXA2RQ3ZCQ2 193 aa16.43■□□□□ 0.22
SKIDA1-201ENST00000444772 NHP2Q9NX24 153 aaKnown RBP16.43■□□□□ 0.22
SKIDA1-201ENST00000444772 NEXN-AS1Q8NBZ9 246 aa16.43■□□□□ 0.22
SKIDA1-201ENST00000444772 COL6A6A6NMZ7 2263 aa16.43■□□□□ 0.22
SKIDA1-201ENST00000444772 SPOCK3Q9BQ16 436 aa16.42■□□□□ 0.22
SKIDA1-201ENST00000444772 CSTL1Q9H114 145 aa16.42■□□□□ 0.22
SKIDA1-201ENST00000444772 IGHV3OR16-10A0A075B7F0 116 aa16.42■□□□□ 0.22
SKIDA1-201ENST00000444772 J3KRW8 73 aa16.42■□□□□ 0.22
SKIDA1-201ENST00000444772 SPTBN1Q01082 2364 aaKnown RBP16.42■□□□□ 0.22
SKIDA1-201ENST00000444772 C14orf178Q8N769 122 aaPredicted RBP16.42■□□□□ 0.22
SKIDA1-201ENST00000444772 OR11H12B2RN74 326 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 BRD3OSQ6XYD6 125 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 POM121L12Q8N7R1 296 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 OR11H1Q8NG94 326 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 OR11H2Q8NH07 326 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 PIMREGQ9BSJ6 248 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 LINC01549A6NIU2 74 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 E9PLD3 99 aa16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 RNASE4P34096 147 aaKnown RBP16.41■□□□□ 0.22
SKIDA1-201ENST00000444772 NXPH4O95158 308 aa16.4■□□□□ 0.22
SKIDA1-201ENST00000444772 K7ERJ3 54 aa16.4■□□□□ 0.22
SKIDA1-201ENST00000444772 RPL11P62913 178 aaKnown RBP16.4■□□□□ 0.22
SKIDA1-201ENST00000444772 SAMD13Q5VXD3 122 aa16.4■□□□□ 0.22
SKIDA1-201ENST00000444772 MYMXA0A1B0GTQ4 84 aa16.39■□□□□ 0.21
SKIDA1-201ENST00000444772 C2orf66Q6UXQ4 117 aa16.39■□□□□ 0.21
SKIDA1-201ENST00000444772 HIST1H4GQ99525 98 aa16.39■□□□□ 0.21
SKIDA1-201ENST00000444772 A6NDX4 124 aa16.39■□□□□ 0.21
SKIDA1-201ENST00000444772 RPL32P62910 135 aaKnown RBP16.39■□□□□ 0.21
SKIDA1-201ENST00000444772 RPL39LQ96EH5 51 aaKnown RBP16.39■□□□□ 0.21
SKIDA1-201ENST00000444772 HIVEP3Q5T1R4 2406 aa16.38■□□□□ 0.21
SKIDA1-201ENST00000444772 IGLL5B9A064 214 aa16.38■□□□□ 0.21
SKIDA1-201ENST00000444772 MGPP08493 103 aa16.38■□□□□ 0.21
SKIDA1-201ENST00000444772 RNASE3P12724 160 aaKnown RBP16.38■□□□□ 0.21
SKIDA1-201ENST00000444772 RHPN1-AS1Q9BWJ2 59 aa16.38■□□□□ 0.21
SKIDA1-201ENST00000444772 DAZ1Q9NQZ3 744 aaKnown RBP16.38■□□□□ 0.21
SKIDA1-201ENST00000444772 RNF223E7ERA6 249 aa16.37■□□□□ 0.21
SKIDA1-201ENST00000444772 C12orf74Q32Q52 190 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms