RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TMEM238C9JI98 176 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 F6UB75 175 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 PEX7O00628 323 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 TCTAP57738 103 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 PSG3Q16557 428 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 EIF4E3Q8N5X7 224 aaKnown RBP6.32□□□□□ -1.4
USP6NL-203ENST00000443016 CYB561D1Q8N8Q1 229 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 KMT2AQ03164 3969 aa6.32□□□□□ -1.4
USP6NL-203ENST00000443016 TRAV10A0A0B4J240 114 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 UBE2G1P62253 170 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 PRR27Q6MZM9 219 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 EPDR1Q9UM22 224 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 TRAV8-2A0A0B4J237 113 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 F5H697 171 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 TCRAP04437 139 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 CEBPGP53567 150 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 OR10J6PQ8NGY7 276 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 TMEM208Q9BTX3 173 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 SLC35B3Q9H1N7 401 aa6.31□□□□□ -1.4
USP6NL-203ENST00000443016 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 SCO2A0A1W2PP80 73 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 NPIPB6E9PJ23 425 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 M0R3E3 92 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 MAP1LC3CQ9BXW4 147 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 CELA1Q9UNI1 258 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 GOLT1BQ9Y3E0 138 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 A0A0J9YX75 114 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 RBAKDNA6NC62 111 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 SMIM9A6NGZ8 99 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 PCP4L1A6NKN8 68 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
USP6NL-203ENST00000443016 GNG5P63218 68 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
USP6NL-203ENST00000443016 GOLT1AQ6ZVE7 132 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 FMC1Q96HJ9 113 aa6.3□□□□□ -1.4
USP6NL-203ENST00000443016 TSPAN13O95857 204 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 SFTA3P0C7M3 94 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 SPART-AS1P0CW21 52 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 PMCHP20382 165 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
USP6NL-203ENST00000443016 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 SOHLH1Q5JUK2 328 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 TMEM78Q5T7P6 136 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 TMEM75Q8N9X5 138 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 NDFIP1Q9BT67 221 aa6.29□□□□□ -1.4
USP6NL-203ENST00000443016 IGHV4-4A0A075B6R2 117 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF705FA8MVS1 300 aaPredicted RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 DUSP14O95147 198 aaKnown RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF705DP0CH99 300 aaPredicted RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF705BP0CI00 300 aaPredicted RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 HIST1H1AQ02539 215 aaPredicted RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 PNRC1Q12796 327 aaPredicted RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 C12orf74Q32Q52 190 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 OR4C5Q8NGB2 326 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 S100A12P80511 92 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 SRSF3P84103 164 aaKnown RBP6.28□□□□□ -1.4
USP6NL-203ENST00000443016 RRN3P1Q2M238 152 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 ZFP82Q8N141 532 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 OR8A1Q8NGG7 326 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 PARLQ9H300 379 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 APLNQ9ULZ1 77 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 BIRC6Q9NR09 4857 aa6.28□□□□□ -1.4
USP6NL-203ENST00000443016 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.4
USP6NL-203ENST00000443016 ZNF727A8MUV8 499 aa6.27□□□□□ -1.4
USP6NL-203ENST00000443016 GATCO43716 136 aaKnown RBP6.27□□□□□ -1.4
USP6NL-203ENST00000443016 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.4
USP6NL-203ENST00000443016 TAS2R60P59551 318 aa6.27□□□□□ -1.4
USP6NL-203ENST00000443016 FLI1Q01543 452 aaPredicted RBP6.27□□□□□ -1.4
USP6NL-203ENST00000443016 TMEM183BQ1AE95 376 aa6.27□□□□□ -1.4
USP6NL-203ENST00000443016 NIPSNAP3BQ9BS92 247 aa6.27□□□□□ -1.4
USP6NL-203ENST00000443016 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.4
USP6NL-203ENST00000443016 TEX48A0A1B0GUV7 120 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 KRBOX1C9JBD0 128 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 F8W036 122 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 RPL35P42766 123 aaKnown RBP6.27□□□□□ -1.41
USP6NL-203ENST00000443016 GNG4P50150 75 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 SPINK13Q1W4C9 94 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 FAM222AQ5U5X8 452 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 Q86TA4 180 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 LINC00477Q96M19 166 aa6.27□□□□□ -1.41
USP6NL-203ENST00000443016 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
USP6NL-203ENST00000443016 C9JCJ5 164 aa6.26□□□□□ -1.41
USP6NL-203ENST00000443016 M0R2Z0 102 aa6.26□□□□□ -1.41
USP6NL-203ENST00000443016 ZNF138P52744 262 aa6.26□□□□□ -1.41
USP6NL-203ENST00000443016 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
USP6NL-203ENST00000443016 SMIM12Q96EX1 92 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms