RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 ERCC8Q13216 396 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 KCNS1Q96KK3 526 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 H3BVH4 76 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 TRAV21A0A0B4J279 112 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 GGTLC3B5MD39 225 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 APOHP02749 345 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 TP53TG1Q9Y2A0 90 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 EXPH5Q8NEV8 1989 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 IGHV7-81A0A0B4J1V7 117 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 OVOL1O14753 267 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 ADMP35318 185 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 CD164Q04900 197 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 ASPHD1Q5U4P2 390 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 C9orf139Q6ZV77 190 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 TSKUQ8WUA8 353 aa6.39□□□□□ -1.39
TMEM39A-202ENST00000438581 VCANP13611 3396 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 CENPEQ02224 2701 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 A0A0U1RQV1 116 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 FAM181BA6NEQ2 426 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 NMUP48645 174 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 ZNF138P52744 262 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 LMO4P61968 165 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 ZNF843Q8N446 348 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 SZT2Q5T011 3432 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 EYSQ5T1H1 3165 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 SERF1AO75920 110 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 NDUFV3P56181 108 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 BRWD1-AS2P59051 145 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 PRR20EP86478 221 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 PRR20CP86479 221 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 PRR20DP86480 221 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 PRR20BP86481 221 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 PRR20AP86496 221 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 C1orf229Q6ZS94 237 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 GATD1Q8NB37 220 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 TRAV12-3A0A0B4J271 114 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 IGKV3OR2-268A0A0C4DH90 116 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 DUSP14O95147 198 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 Q6AWC8 147 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 DEFB104AQ8WTQ1 72 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 SLC25A2Q9BXI2 301 aa6.38□□□□□ -1.39
TMEM39A-202ENST00000438581 ORMDL3Q8N138 153 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 ZNF491Q8N8L2 437 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 KIR2DL4Q99706 377 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 PLA2G2EQ9NZK7 142 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 ZNF256Q9Y2P7 627 aaPredicted RBP6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 HTN3P15516 51 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 CTRLP40313 264 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 TMEM258P61165 79 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 BVES-AS1Q5T3Y7 98 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 Q8N9W7 124 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 C17orf77Q96MU5 243 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 ZMAT4Q9H898 229 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 NRN1Q9NPD7 142 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 Q0VG73 95 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 FOXI1Q12951 378 aa6.37□□□□□ -1.39
TMEM39A-202ENST00000438581 TRBV19A0A075B6N1 114 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 TRGV2A0A075B6R0 118 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 DEFB131AP59861 70 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 ZNF114Q8NC26 417 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 UBE2E2Q96LR5 201 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 RHODO00212 210 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 AMTNQ6UX39 209 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 BCL6BQ8N143 479 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 LSM4Q9Y4Z0 139 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 K7EN84 100 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 SH2D1AO60880 128 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 FOXL1Q12952 345 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 DEFB136Q30KP8 78 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 FAM231DQ6ZW35 169 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 PPDPFLQ8WWR9 84 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 MRPL36Q9P0J6 103 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 K7EIM0 57 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 IGKV1-17P01599 117 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 RPL35AP18077 110 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 THAP8Q8NA92 274 aa6.36□□□□□ -1.39
TMEM39A-202ENST00000438581 H3BMG7 143 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 IGLV2-23P01705 113 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 HLA-DMBP28068 263 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 LEPP41159 167 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 Q1RN00 199 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 MORN5Q5VZ52 161 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 Q86TA4 180 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 A0A1W2PPM0 123 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 Q6ZUT4 128 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 ANKRD17O75179 2603 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 CFAP54Q96N23 3096 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 MGAQ8IWI9 3026 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 IGKV1OR2-108A0A075B7D4 117 aa6.35□□□□□ -1.39
TMEM39A-202ENST00000438581 XGP55808 180 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms