RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LSM5Q9Y4Y9 91 aaKnown RBP10.94□□□□□ -0.66
CHCHD3-202ENST00000423635 FGF7P21781 194 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 ATP6V1FQ16864 119 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 TOR2AQ5JU69 321 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 Q8N3U1 123 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 ATP6V0E2Q8NHE4 81 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 TMED6Q8WW62 240 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 PHYHIPLQ96FC7 376 aa10.93□□□□□ -0.66
CHCHD3-202ENST00000423635 H3BMQ9 156 aa10.92□□□□□ -0.66
CHCHD3-202ENST00000423635 TMEM252Q8N6L7 170 aa10.92□□□□□ -0.66
CHCHD3-202ENST00000423635 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
CHCHD3-202ENST00000423635 NPCDR1Q9BY65 106 aa10.92□□□□□ -0.66
CHCHD3-202ENST00000423635 LYRM2Q9NU23 88 aaPredicted RBP10.92□□□□□ -0.66
CHCHD3-202ENST00000423635 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
CHCHD3-202ENST00000423635 DIRC3C9JPN6 131 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 TYMSP04818 313 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 OR10J4P0C629 311 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 MT1HL1P0DM35 61 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 HBG1P69891 147 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 HBG2P69892 147 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 DAZ4Q86SG3 579 aaKnown RBP10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 DAZAP1Q96EP5 407 aaKnown RBP10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 SH3BGRL3Q9H299 93 aa10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 DAZ3Q9NR90 486 aaKnown RBP10.91□□□□□ -0.66
CHCHD3-202ENST00000423635 IGSF23A1L1A6 192 aa10.9□□□□□ -0.66
CHCHD3-202ENST00000423635 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
CHCHD3-202ENST00000423635 CCSO14618 274 aa10.9□□□□□ -0.66
CHCHD3-202ENST00000423635 PVALBP20472 110 aaPredicted RBP10.9□□□□□ -0.66
CHCHD3-202ENST00000423635 HNRNPA3P51991 378 aaKnown RBP10.9□□□□□ -0.66
CHCHD3-202ENST00000423635 RANP62826 216 aaKnown RBP10.9□□□□□ -0.66
CHCHD3-202ENST00000423635 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
CHCHD3-202ENST00000423635 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
CHCHD3-202ENST00000423635 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
CHCHD3-202ENST00000423635 DPPA3Q6W0C5 159 aa10.89□□□□□ -0.67
CHCHD3-202ENST00000423635 STX12Q86Y82 276 aa10.89□□□□□ -0.67
CHCHD3-202ENST00000423635 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
CHCHD3-202ENST00000423635 MGST1P10620 155 aaKnown RBP10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 S100A5P33763 92 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 BTCP35070 178 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 CNPY1Q3B7I2 92 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 RMI2Q96E14 147 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 ATP5SQ99766 215 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 SDF2L1Q9HCN8 221 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 TNXBP22105 4242 aa10.88□□□□□ -0.67
CHCHD3-202ENST00000423635 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
CHCHD3-202ENST00000423635 NOL3O60936 208 aaKnown RBP10.87□□□□□ -0.67
CHCHD3-202ENST00000423635 INPP1P49441 399 aa10.87□□□□□ -0.67
CHCHD3-202ENST00000423635 IL15RAQ13261 267 aa10.87□□□□□ -0.67
CHCHD3-202ENST00000423635 PTH2Q96A98 100 aa10.87□□□□□ -0.67
CHCHD3-202ENST00000423635 C2orf50Q96LR7 162 aa10.87□□□□□ -0.67
CHCHD3-202ENST00000423635 TRAV8-1A0A0A6YYK1 113 aa10.86□□□□□ -0.67
CHCHD3-202ENST00000423635 C5orf51A6NDU8 294 aa10.86□□□□□ -0.67
CHCHD3-202ENST00000423635 FAM25EA8MYX2 175 aa10.86□□□□□ -0.67
CHCHD3-202ENST00000423635 SPANXN2Q5MJ10 180 aa10.86□□□□□ -0.67
CHCHD3-202ENST00000423635 LINC00694P0DN24 101 aa10.85□□□□□ -0.67
CHCHD3-202ENST00000423635 ASB13Q8WXK3 278 aa10.85□□□□□ -0.67
CHCHD3-202ENST00000423635 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
CHCHD3-202ENST00000423635 CENPXA8MT69 81 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 OR7C2O60412 319 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 TRIQKQ629K1 86 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 THAP6Q8TBB0 222 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 A0A087WWC5 75 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 SEC11BP0C7V7 166 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 RAB32Q13637 225 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 C9orf85Q96MD7 179 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
CHCHD3-202ENST00000423635 PGPEP1LA6NFU8 196 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 S100A10P60903 97 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 NHLH2Q02577 135 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 Q6ZRU5 148 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 CYB561D1Q8N8Q1 229 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 HYLS1Q96M11 299 aa10.83□□□□□ -0.68
CHCHD3-202ENST00000423635 PGPA6NDG6 321 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 F6UZH7 168 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 UBE2L3P68036 154 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 GAGE1Q13065 139 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 GAGE4Q13068 117 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 GAGE5Q13069 117 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 ZNF506Q5JVG8 444 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 SDHCQ99643 169 aaPredicted RBP10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 KCNIP2Q9NS61 270 aa10.82□□□□□ -0.68
CHCHD3-202ENST00000423635 C14orf177Q52M58 125 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 ZFP2Q6ZN57 461 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 NIT1Q86X76 327 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 OR5C1Q8NGR4 320 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 CMTM2Q8TAZ6 248 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 NMES1Q9C002 83 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 WDR61Q9GZS3 305 aaKnown RBP10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 C11orf21Q9P2W6 132 aa10.81□□□□□ -0.68
CHCHD3-202ENST00000423635 FAM74A1Q5RGS3 127 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms