RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 LY96Q9Y6Y9 160 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 IGKV3D-20A0A0C4DH25 116 aa11.32□□□□□ -0.6
DDX55-203ENST00000421670 NHLRC4P0CG21 123 aaPredicted RBP11.32□□□□□ -0.6
DDX55-203ENST00000421670 MIFP14174 115 aa11.32□□□□□ -0.6
DDX55-203ENST00000421670 RPL19P84098 196 aaKnown RBP11.32□□□□□ -0.6
DDX55-203ENST00000421670 ADIRFQ15847 76 aa11.32□□□□□ -0.6
DDX55-203ENST00000421670 SLC7A5P1Q8MH63 180 aa11.32□□□□□ -0.6
DDX55-203ENST00000421670 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
DDX55-203ENST00000421670 TMSB15BA0A087X1C1 80 aa11.31□□□□□ -0.6
DDX55-203ENST00000421670 C19orf71A6NCJ1 209 aa11.31□□□□□ -0.6
DDX55-203ENST00000421670 B4DEV8 164 aa11.31□□□□□ -0.6
DDX55-203ENST00000421670 TYMSP04818 313 aa11.31□□□□□ -0.6
DDX55-203ENST00000421670 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
DDX55-203ENST00000421670 TDRG1Q3Y452 100 aa11.31□□□□□ -0.6
DDX55-203ENST00000421670 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
DDX55-203ENST00000421670 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
DDX55-203ENST00000421670 LINC00467Q9BRT7 94 aa11.31□□□□□ -0.6
DDX55-203ENST00000421670 SMIM9A6NGZ8 99 aa11.3□□□□□ -0.6
DDX55-203ENST00000421670 F8W036 122 aa11.3□□□□□ -0.6
DDX55-203ENST00000421670 GNRH2O43555 120 aa11.3□□□□□ -0.6
DDX55-203ENST00000421670 EMP1P54849 157 aa11.3□□□□□ -0.6
DDX55-203ENST00000421670 SDF2L1Q9HCN8 221 aa11.3□□□□□ -0.6
DDX55-203ENST00000421670 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
DDX55-203ENST00000421670 KRBOX1C9JBD0 128 aa11.29□□□□□ -0.6
DDX55-203ENST00000421670 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
DDX55-203ENST00000421670 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
DDX55-203ENST00000421670 C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
DDX55-203ENST00000421670 KCNS1Q96KK3 526 aa11.29□□□□□ -0.6
DDX55-203ENST00000421670 A0A0J9YWU9 116 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 P01737 135 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
DDX55-203ENST00000421670 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 NUDT10Q8NFP7 164 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 ISOC2Q96AB3 205 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 GSN-AS1Q9NRJ2 163 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 ZNF575Q86XF7 245 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 U3KQK5 164 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 MUC4Q99102 2169 aa11.28□□□□□ -0.6
DDX55-203ENST00000421670 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.61
DDX55-203ENST00000421670 TMEM189A5PLL7 270 aa11.27□□□□□ -0.61
DDX55-203ENST00000421670 ZNF493Q6ZR52 646 aa11.27□□□□□ -0.61
DDX55-203ENST00000421670 OR2D3Q8NGH3 330 aa11.27□□□□□ -0.61
DDX55-203ENST00000421670 C11orf68Q9H3H3 251 aaKnown RBP11.27□□□□□ -0.61
DDX55-203ENST00000421670 GZMBP10144 247 aa11.26□□□□□ -0.61
DDX55-203ENST00000421670 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
DDX55-203ENST00000421670 SFRP2Q96HF1 295 aa11.26□□□□□ -0.61
DDX55-203ENST00000421670 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
DDX55-203ENST00000421670 CELA1Q9UNI1 258 aa11.26□□□□□ -0.61
DDX55-203ENST00000421670 SNURFLB1AK76 121 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 H3BVH4 76 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 TCL1AP56279 114 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 NDUFA5Q16718 116 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 FAM231DQ6ZW35 169 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 IL17DQ8TAD2 202 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
DDX55-203ENST00000421670 TIMM8BQ9Y5J9 83 aaPredicted RBP11.25□□□□□ -0.61
DDX55-203ENST00000421670 DNAH7Q8WXX0 4024 aa11.25□□□□□ -0.61
DDX55-203ENST00000421670 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
DDX55-203ENST00000421670 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
DDX55-203ENST00000421670 S100A4P26447 101 aaKnown RBP11.24□□□□□ -0.61
DDX55-203ENST00000421670 ASIPP42127 132 aa11.24□□□□□ -0.61
DDX55-203ENST00000421670 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
DDX55-203ENST00000421670 C10orf91Q5T1B1 145 aa11.24□□□□□ -0.61
DDX55-203ENST00000421670 FAM222AQ5U5X8 452 aa11.24□□□□□ -0.61
DDX55-203ENST00000421670 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
DDX55-203ENST00000421670 CSMD3Q7Z407 3707 aa11.23□□□□□ -0.61
DDX55-203ENST00000421670 C15orf54Q8N8G6 183 aa11.23□□□□□ -0.61
DDX55-203ENST00000421670 CARHSP1Q9Y2V2 147 aaKnown RBP11.23□□□□□ -0.61
DDX55-203ENST00000421670 OR10G8Q8NGN5 311 aa11.22□□□□□ -0.61
DDX55-203ENST00000421670 C9orf85Q96MD7 179 aa11.22□□□□□ -0.61
DDX55-203ENST00000421670 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
DDX55-203ENST00000421670 DKK2Q9UBU2 259 aa11.22□□□□□ -0.61
DDX55-203ENST00000421670 V9GYV3 84 aa11.22□□□□□ -0.61
DDX55-203ENST00000421670 CXCL1P09341 107 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 ARMS2P0C7Q2 107 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 RPS20P60866 119 aaKnown RBP11.21□□□□□ -0.61
DDX55-203ENST00000421670 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
DDX55-203ENST00000421670 DNLZQ5SXM8 178 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 Q6ZTI0 123 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 EDA2RQ9HAV5 297 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.61
DDX55-203ENST00000421670 IL36BQ9NZH7 164 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 NACAE9PAV3 2078 aa11.21□□□□□ -0.61
DDX55-203ENST00000421670 TRGV1A0A0A0MS02 117 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 RNF212Q495C1 297 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 LYRM9A8MSI8 78 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 SPINK4O60575 86 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 APOC3P02656 99 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
DDX55-203ENST00000421670 SPART-AS1P0CW21 52 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms