RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 HEATR5AQ86XA9 2040 aa9.46□□□□□ -0.89
UBR4-205ENST00000417040 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.89
UBR4-205ENST00000417040 IGHV1-69P01742 117 aa9.46□□□□□ -0.89
UBR4-205ENST00000417040 DAD1P61803 113 aa9.46□□□□□ -0.89
UBR4-205ENST00000417040 MAP1BP46821 2468 aaKnown RBP9.46□□□□□ -0.89
UBR4-205ENST00000417040 GTSF1Q8WW33 167 aa9.46□□□□□ -0.89
UBR4-205ENST00000417040 RNF166Q96A37 237 aaPredicted RBP9.46□□□□□ -0.89
UBR4-205ENST00000417040 AGPAT4-IT1Q9H0P7 198 aa9.46□□□□□ -0.89
UBR4-205ENST00000417040 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
UBR4-205ENST00000417040 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
UBR4-205ENST00000417040 NDUFA4O00483 81 aa9.46□□□□□ -0.9
UBR4-205ENST00000417040 C20orf78Q9BR46 151 aa9.46□□□□□ -0.9
UBR4-205ENST00000417040 HEATR1Q9H583 2144 aaKnown RBP9.46□□□□□ -0.9
UBR4-205ENST00000417040 NLRC5Q86WI3 1866 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 DSCR9P59020 149 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 HERVK_113P63121 156 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 RLFQ13129 1914 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 CR1LQ2VPA4 569 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 A0A0J9YY99 117 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 CHD3Q12873 2000 aaKnown RBP9.45□□□□□ -0.9
UBR4-205ENST00000417040 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
UBR4-205ENST00000417040 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
UBR4-205ENST00000417040 TP73-AS1Q9UF72 201 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 RHODO00212 210 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 GATA4P43694 442 aa9.45□□□□□ -0.9
UBR4-205ENST00000417040 ICOSQ9Y6W8 199 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 LY6G6EA0A0G2JKS1 128 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 U3KQA8 63 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 IGHV7-4-1A0A0J9YVY3 117 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 FAM236AA0A1B0GUQ0 79 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 FAM236BA0A1B0GV22 79 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 MSMBP08118 114 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 SPANXA1Q9NS26 97 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
UBR4-205ENST00000417040 CLEC2BQ92478 149 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 A4D1N5 150 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 NDUFS5O43920 106 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 C11orf53Q8IXP5 236 aa9.44□□□□□ -0.9
UBR4-205ENST00000417040 ETV2O00321 342 aaPredicted RBP9.43□□□□□ -0.9
UBR4-205ENST00000417040 NBL1P41271 181 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 Q6ZS92 163 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 PTH2Q96A98 100 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
UBR4-205ENST00000417040 DIDO1Q9BTC0 2240 aaKnown RBP9.43□□□□□ -0.9
UBR4-205ENST00000417040 PRSS33Q8NF86 280 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 G3V4G9 280 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 PATE2Q6UY27 113 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 U3KQE9 123 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 DEFB136Q30KP8 78 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
UBR4-205ENST00000417040 C5orf38Q86SI9 138 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 ORMDL1Q9P0S3 153 aa9.43□□□□□ -0.9
UBR4-205ENST00000417040 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
UBR4-205ENST00000417040 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
UBR4-205ENST00000417040 IGHG2P01859 326 aa9.42□□□□□ -0.9
UBR4-205ENST00000417040 FRMPD3Q5JV73 1810 aa9.42□□□□□ -0.9
UBR4-205ENST00000417040 IGLV2-23P01705 113 aa9.42□□□□□ -0.9
UBR4-205ENST00000417040 GP9P14770 177 aa9.42□□□□□ -0.9
UBR4-205ENST00000417040 A0A1B0GX51 115 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 THSD7BQ9C0I4 1608 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 FOXI1Q12951 378 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 DEFB1P60022 68 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 ZFP2Q6ZN57 461 aa9.41□□□□□ -0.9
UBR4-205ENST00000417040 C22orf46C9J442 243 aa9.4□□□□□ -0.9
UBR4-205ENST00000417040 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
UBR4-205ENST00000417040 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
UBR4-205ENST00000417040 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
UBR4-205ENST00000417040 NCR3O14931 201 aa9.4□□□□□ -0.9
UBR4-205ENST00000417040 BAALCQ8WXS3 180 aa9.4□□□□□ -0.9
UBR4-205ENST00000417040 COX7B2Q8TF08 81 aa9.4□□□□□ -0.91
UBR4-205ENST00000417040 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 TRAV4A0A0B4J268 109 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 IGLV1-44P01699 117 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 DENND4AQ7Z401 1863 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 PI4KAP42356 2102 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 KIAA1671Q9BY89 1806 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 Q96MF0 132 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 TNRC6BQ9UPQ9 1833 aaKnown RBP9.39□□□□□ -0.91
UBR4-205ENST00000417040 DOCK8Q8NF50 2099 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 FAM186AA6NE01 2351 aa9.39□□□□□ -0.91
UBR4-205ENST00000417040 CLPSL1A2RUU4 121 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 ARHGAP21Q5T5U3 1957 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 A0A0B4J2C4 111 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 TMEM258P61165 79 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 SLC25A29Q8N8R3 303 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 I3L2K1 104 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 IGLV2-14P01704 120 aa9.38□□□□□ -0.91
UBR4-205ENST00000417040 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
UBR4-205ENST00000417040 IGKV1OR2-108A0A075B7D4 117 aa9.37□□□□□ -0.91
UBR4-205ENST00000417040 E7EUB6 86 aa9.37□□□□□ -0.91
UBR4-205ENST00000417040 GRNP28799 593 aaKnown RBP9.37□□□□□ -0.91
UBR4-205ENST00000417040 LINC01620Q4KN68 170 aa9.37□□□□□ -0.91
UBR4-205ENST00000417040 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
UBR4-205ENST00000417040 OPRPNQ99935 248 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms