RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 RAB14P61106 215 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 LGALS9BQ3B8N2 356 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 CENPWQ5EE01 88 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 DNLZQ5SXM8 178 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 NDUFAF3Q9BU61 184 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 MED9Q9NWA0 146 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
ATG4B-207ENST00000415107 STARD9Q9P2P6 4700 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 PRM2P04554 102 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 TYMSP04818 313 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 GNG4P50150 75 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 ZNF415Q09FC8 603 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 C12orf74Q32Q52 190 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 SPXQ9BT56 116 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 EIF5A2Q9GZV4 153 aaKnown RBP8.49□□□□□ -1.05
ATG4B-207ENST00000415107 PARLQ9H300 379 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
ATG4B-207ENST00000415107 IGKV3D-20A0A0C4DH25 116 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 NUPR2A6NF83 97 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 SPINK4O60575 86 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 SH2D1AO60880 128 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 SRP19P09132 144 aaKnown RBP8.48□□□□□ -1.05
ATG4B-207ENST00000415107 HTN1P15515 57 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 PIK3CD-AS1Q5SR53 167 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 MUC21Q5SSG8 566 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 PTH2Q96A98 100 aa8.48□□□□□ -1.05
ATG4B-207ENST00000415107 RAB19A4D1S5 217 aa8.47□□□□□ -1.05
ATG4B-207ENST00000415107 EMP1P54849 157 aa8.47□□□□□ -1.05
ATG4B-207ENST00000415107 NANOS2P60321 138 aaKnown RBP8.47□□□□□ -1.05
ATG4B-207ENST00000415107 PEA15Q15121 130 aa8.47□□□□□ -1.05
ATG4B-207ENST00000415107 PCNPQ8WW12 178 aaKnown RBP8.47□□□□□ -1.05
ATG4B-207ENST00000415107 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
ATG4B-207ENST00000415107 NOP10Q9NPE3 64 aaKnown RBP8.47□□□□□ -1.05
ATG4B-207ENST00000415107 GSN-AS1Q9NRJ2 163 aa8.47□□□□□ -1.05
ATG4B-207ENST00000415107 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 C19orf71A6NCJ1 209 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 KRBOX1C9JBD0 128 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 MED14OSP0DP75 135 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 RNASE3P12724 160 aaKnown RBP8.46□□□□□ -1.06
ATG4B-207ENST00000415107 FAM74A3Q4VXF1 159 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 CASC10Q5T4H9 136 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 Q6ZTC4 211 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 ZNF575Q86XF7 245 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 NHLRC2Q8NBF2 726 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.06
ATG4B-207ENST00000415107 RASL10AQ92737 203 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 IL36BQ9NZH7 164 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 MDFICQ9P1T7 246 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 NAGKQ9UJ70 344 aa8.46□□□□□ -1.06
ATG4B-207ENST00000415107 TCTAP57738 103 aa8.45□□□□□ -1.06
ATG4B-207ENST00000415107 DAD1P61803 113 aa8.45□□□□□ -1.06
ATG4B-207ENST00000415107 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
ATG4B-207ENST00000415107 FAM210BQ96KR6 192 aa8.45□□□□□ -1.06
ATG4B-207ENST00000415107 B4DEV8 164 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 M0R2P5 195 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 GNRH2O43555 120 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 ORM1P02763 201 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 SCRT2Q9NQ03 307 aa8.44□□□□□ -1.06
ATG4B-207ENST00000415107 PLECQ15149 4684 aaKnown RBP8.43□□□□□ -1.06
ATG4B-207ENST00000415107 C9JQL5 133 aa8.43□□□□□ -1.06
ATG4B-207ENST00000415107 ATP5G1P05496 136 aa8.43□□□□□ -1.06
ATG4B-207ENST00000415107 ASIPP42127 132 aa8.43□□□□□ -1.06
ATG4B-207ENST00000415107 SRSF3P84103 164 aaKnown RBP8.43□□□□□ -1.06
ATG4B-207ENST00000415107 Q6ZTI0 123 aa8.43□□□□□ -1.06
ATG4B-207ENST00000415107 LINC01551Q86U37 167 aa8.43□□□□□ -1.06
ATG4B-207ENST00000415107 OCC1Q8TAD7 63 aa8.43□□□□□ -1.06
ATG4B-207ENST00000415107 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
ATG4B-207ENST00000415107 KLK5Q9Y337 293 aaPredicted RBP8.43□□□□□ -1.06
ATG4B-207ENST00000415107 DEFB131BA0A096LNP1 70 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 PGPEP1LA6NFU8 196 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 ZNF727A8MUV8 499 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 K7EN84 100 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 SNAI2O43623 268 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 CIDEAO60543 219 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 OR5AL1P0C617 328 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 MGST1P10620 155 aaKnown RBP8.42□□□□□ -1.06
ATG4B-207ENST00000415107 RPS20P60866 119 aaKnown RBP8.42□□□□□ -1.06
ATG4B-207ENST00000415107 CT83Q5H943 113 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 UQCC3Q6UW78 93 aa8.42□□□□□ -1.06
ATG4B-207ENST00000415107 GAGE12BA1L429 117 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 M0R036 132 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 GAGE7O76087 117 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 NXPH4O95158 308 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 P01737 135 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 GAGE12FP0CL80 117 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 GAGE12GP0CL81 117 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 GAGE12IP0CL82 117 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
ATG4B-207ENST00000415107 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
ATG4B-207ENST00000415107 DAZAP1Q96EP5 407 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms