RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 UQCR10Q9UDW1 63 aa9.58□□□□□ -0.88
ATG9A-203ENST00000409033 A0A1B0GXF2 115 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 NUDT3O95989 172 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 SIGLEC8Q9NYZ4 499 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 GCN1Q92616 2671 aaKnown RBP9.57□□□□□ -0.88
ATG9A-203ENST00000409033 FBN2P35556 2912 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 IGHV7-4-1A0A0J9YVY3 117 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 SCGB2A2Q13296 93 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 MIEN1Q9BRT3 115 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 SNHG12Q9BXW3 62 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 VPREB3Q9UKI3 123 aa9.57□□□□□ -0.88
ATG9A-203ENST00000409033 TRAV21A0A0B4J279 112 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 CBY3A6NI87 242 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 C18orf65Q6ZTR6 163 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 SRSF2Q01130 221 aaKnown RBP9.56□□□□□ -0.88
ATG9A-203ENST00000409033 ZNF56Q15929 161 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 MEGF9Q9H1U4 602 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 A0A087WW49 117 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 GATA3P23771 443 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 CYB5R2Q6BCY4 276 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 STPG4Q8N801 248 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 OR11H1Q8NG94 326 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 TMEM190Q8WZ59 177 aa9.56□□□□□ -0.88
ATG9A-203ENST00000409033 ZNF48Q96MX3 618 aaPredicted RBP9.56□□□□□ -0.88
ATG9A-203ENST00000409033 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 HOXD3P31249 432 aaPredicted RBP9.55□□□□□ -0.88
ATG9A-203ENST00000409033 C16orf54Q6UWD8 224 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 FOXC2Q99958 501 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
ATG9A-203ENST00000409033 GOLT1BQ9Y3E0 138 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
ATG9A-203ENST00000409033 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 Q6ZVH6 145 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 TMEM160Q9NX00 188 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 IGLL1P15814 213 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 TCTEX1D4Q5JR98 221 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 C11orf21Q9P2W6 132 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 SMPXQ9UHP9 88 aa9.55□□□□□ -0.88
ATG9A-203ENST00000409033 TRAV9-2A0A087WT02 112 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 IGKV3D-20A0A0C4DH25 116 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 FAM231BA6NCW3 169 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 IGHV4-31P0DP07 118 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 DEFB131AP59861 70 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 OVOL1O14753 267 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 PRR9Q5T870 116 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 CHCHD1Q96BP2 118 aaKnown RBP9.54□□□□□ -0.88
ATG9A-203ENST00000409033 HBDP02042 147 aa9.54□□□□□ -0.88
ATG9A-203ENST00000409033 TCF21O43680 179 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 NSUN5P1Q3KNT7 163 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 TMEM158Q8WZ71 300 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 TEP1Q99973 2627 aaKnown RBP9.53□□□□□ -0.88
ATG9A-203ENST00000409033 A0A1B0GW15 77 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 IGHG4P01861 327 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 EMP1P54849 157 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 VAMP3Q15836 100 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 TEX43Q6ZNM6 134 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 MS4A6AQ9H2W1 248 aa9.53□□□□□ -0.88
ATG9A-203ENST00000409033 APCP25054 2843 aa9.52□□□□□ -0.88
ATG9A-203ENST00000409033 MXRA5Q9NR99 2828 aa9.52□□□□□ -0.88
ATG9A-203ENST00000409033 ZNF124Q15973 351 aa9.52□□□□□ -0.89
ATG9A-203ENST00000409033 SLC25A34Q6PIV7 304 aa9.52□□□□□ -0.89
ATG9A-203ENST00000409033 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
ATG9A-203ENST00000409033 NPIPB6E9PJ23 425 aa9.52□□□□□ -0.89
ATG9A-203ENST00000409033 JPT2Q9H910 190 aa9.52□□□□□ -0.89
ATG9A-203ENST00000409033 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.89
ATG9A-203ENST00000409033 SRSF1Q07955 248 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATG9A-203ENST00000409033 A0A087X0K7 114 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 TRAV8-6A0A0B4J262 113 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 LAMTOR2Q9Y2Q5 125 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 J3QKU1 62 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 PRM2P04554 102 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 SPATA12Q7Z6I5 190 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 URB1-AS1Q96HZ7 61 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
ATG9A-203ENST00000409033 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
ATG9A-203ENST00000409033 APRG1Q8IVJ8 170 aa9.5□□□□□ -0.89
ATG9A-203ENST00000409033 NAA38Q9BRA0 125 aaKnown RBP9.5□□□□□ -0.89
ATG9A-203ENST00000409033 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
ATG9A-203ENST00000409033 RAB37Q96AX2 223 aa9.5□□□□□ -0.89
ATG9A-203ENST00000409033 RPL39LQ96EH5 51 aaKnown RBP9.5□□□□□ -0.89
ATG9A-203ENST00000409033 VPS13CQ709C8 3753 aa9.5□□□□□ -0.89
ATG9A-203ENST00000409033 OR2K2Q8NGT1 345 aa9.49□□□□□ -0.89
ATG9A-203ENST00000409033 TSPOP30536 169 aa9.49□□□□□ -0.89
ATG9A-203ENST00000409033 ATRQ13535 2644 aa9.49□□□□□ -0.89
ATG9A-203ENST00000409033 MPV17L2Q567V2 206 aa9.49□□□□□ -0.89
ATG9A-203ENST00000409033 COL5A1-AS1Q5SY13 56 aa9.49□□□□□ -0.89
ATG9A-203ENST00000409033 C2orf70A6NJV1 201 aa9.48□□□□□ -0.89
ATG9A-203ENST00000409033 J3QLI3 93 aa9.48□□□□□ -0.89
ATG9A-203ENST00000409033 KIR2DL5BA0A0G2JN68 375 aa9.48□□□□□ -0.89
ATG9A-203ENST00000409033 KIR2DL5BA0A0G2JPC4 375 aa9.48□□□□□ -0.89
ATG9A-203ENST00000409033 KIR2DL5AQ8N109 375 aa9.48□□□□□ -0.89
ATG9A-203ENST00000409033 TTTY13Q9BZ97 58 aa9.48□□□□□ -0.89
ATG9A-203ENST00000409033 DKK2Q9UBU2 259 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms