RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 SPANXN1Q5VSR9 72 aa12.28□□□□□ -0.44
CDKN1A-203ENST00000405375 SMIM15Q7Z3B0 74 aa12.28□□□□□ -0.44
CDKN1A-203ENST00000405375 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
CDKN1A-203ENST00000405375 TRAV21A0A0B4J279 112 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 NUDT3O95989 172 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 PSMB8P28062 276 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 LEPP41159 167 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 DEFB112Q30KQ8 113 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 APRG1Q8IVJ8 170 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 Q8N8P6 123 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 LINC01356Q8N9X3 169 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 ORAOV1Q8WV07 137 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 SMPXQ9UHP9 88 aa12.27□□□□□ -0.44
CDKN1A-203ENST00000405375 J3KRW8 73 aa12.27□□□□□ -0.45
CDKN1A-203ENST00000405375 FGF6P10767 208 aa12.27□□□□□ -0.45
CDKN1A-203ENST00000405375 BVES-AS1Q5T3Y7 98 aa12.27□□□□□ -0.45
CDKN1A-203ENST00000405375 Q6ZVH6 145 aa12.27□□□□□ -0.45
CDKN1A-203ENST00000405375 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.45
CDKN1A-203ENST00000405375 UFC1Q9Y3C8 167 aa12.27□□□□□ -0.45
CDKN1A-203ENST00000405375 F6UB75 175 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 K7EMT4 169 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 COX11Q9Y6N1 276 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 TRBV7-9A0A0J9YWB2 115 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 WFDC3Q8IUB2 231 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 OR1N2Q8NGR9 330 aa12.26□□□□□ -0.45
CDKN1A-203ENST00000405375 IGKV3-7A0A075B6H7 116 aa12.25□□□□□ -0.45
CDKN1A-203ENST00000405375 EDN2P20800 178 aa12.25□□□□□ -0.45
CDKN1A-203ENST00000405375 SRSF1Q07955 248 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDKN1A-203ENST00000405375 C12orf54Q6X4T0 127 aa12.25□□□□□ -0.45
CDKN1A-203ENST00000405375 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
CDKN1A-203ENST00000405375 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
CDKN1A-203ENST00000405375 KIR3DS1Q14943 382 aa12.24□□□□□ -0.45
CDKN1A-203ENST00000405375 DKK2Q9UBU2 259 aa12.24□□□□□ -0.45
CDKN1A-203ENST00000405375 FBN2P35556 2912 aa12.24□□□□□ -0.45
CDKN1A-203ENST00000405375 FAM208BQ5VWN6 2430 aa12.24□□□□□ -0.45
CDKN1A-203ENST00000405375 ANKRD17O75179 2603 aaKnown RBP12.24□□□□□ -0.45
CDKN1A-203ENST00000405375 J3QLI3 93 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 SELENOKQ9Y6D0 94 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 C10orf99Q6UWK7 81 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 DCANP1Q8TF63 244 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 MRAP2Q96G30 205 aa12.23□□□□□ -0.45
CDKN1A-203ENST00000405375 CD5LO43866 347 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 RNASE4P34096 147 aaKnown RBP12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 ASIPP42127 132 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 ODF1Q14990 250 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 ZMAT4Q9H898 229 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 SRD5A1P18405 259 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 POLQO75417 2590 aa12.22□□□□□ -0.45
CDKN1A-203ENST00000405375 A1L4Q6 167 aa12.21□□□□□ -0.45
CDKN1A-203ENST00000405375 TMEM89A2RUT3 159 aa12.21□□□□□ -0.45
CDKN1A-203ENST00000405375 TGFAP01135 160 aa12.21□□□□□ -0.45
CDKN1A-203ENST00000405375 MAPK1IP1LQ8NDC0 245 aa12.21□□□□□ -0.45
CDKN1A-203ENST00000405375 LRRK2Q5S007 2527 aa12.21□□□□□ -0.45
CDKN1A-203ENST00000405375 KLLNB2CW77 178 aa12.21□□□□□ -0.46
CDKN1A-203ENST00000405375 M0R381 172 aa12.21□□□□□ -0.46
CDKN1A-203ENST00000405375 SPRY2O43597 315 aa12.21□□□□□ -0.46
CDKN1A-203ENST00000405375 S100A4P26447 101 aaKnown RBP12.21□□□□□ -0.46
CDKN1A-203ENST00000405375 LAGE3Q14657 143 aa12.21□□□□□ -0.46
CDKN1A-203ENST00000405375 TAX1BP3O14907 124 aa12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 RNASE3P12724 160 aaKnown RBP12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 ZANQ9Y493 2812 aa12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 COX6B1P14854 86 aa12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 SAMD13Q5VXD3 122 aa12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 PHLDA3Q9Y5J5 127 aa12.2□□□□□ -0.46
CDKN1A-203ENST00000405375 UBR5O95071 2799 aaPredicted RBP12.19□□□□□ -0.46
CDKN1A-203ENST00000405375 GNRH2O43555 120 aa12.19□□□□□ -0.46
CDKN1A-203ENST00000405375 FSHBP01225 129 aa12.19□□□□□ -0.46
CDKN1A-203ENST00000405375 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
CDKN1A-203ENST00000405375 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
CDKN1A-203ENST00000405375 CCL25O15444 150 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 PRSS1P07477 247 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 ID1P41134 155 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 ATP5LO75964 103 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 TCTAP57738 103 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 C14orf178Q8N769 122 aaPredicted RBP12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 RASL10AQ92737 203 aa12.18□□□□□ -0.46
CDKN1A-203ENST00000405375 NXPH4O95158 308 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 VPREB3Q9UKI3 123 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 DOPEY2Q9Y3R5 2298 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 CENPEQ02224 2701 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 UBE2V1Q13404 147 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 PCP2Q8IVA1 136 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 OR9G4Q8NGQ1 327 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 FOXC2Q99958 501 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 MUC4Q99102 2169 aa12.17□□□□□ -0.46
CDKN1A-203ENST00000405375 RNF223E7ERA6 249 aa12.16□□□□□ -0.46
CDKN1A-203ENST00000405375 SIVA1O15304 175 aa12.16□□□□□ -0.46
CDKN1A-203ENST00000405375 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
CDKN1A-203ENST00000405375 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
CDKN1A-203ENST00000405375 PSMG4Q5JS54 123 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms