RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 EPDR1Q9UM22 224 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 HHLA3Q9XRX5 114 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 LRP1BQ9NZR2 4599 aa10.92□□□□□ -0.66
ATG4B-203ENST00000400772 TYMSP04818 313 aa10.91□□□□□ -0.66
ATG4B-203ENST00000400772 SFTA3P0C7M3 94 aa10.91□□□□□ -0.66
ATG4B-203ENST00000400772 IQCF2Q8IXL9 164 aa10.91□□□□□ -0.66
ATG4B-203ENST00000400772 ZNF479Q96JC4 524 aa10.91□□□□□ -0.66
ATG4B-203ENST00000400772 PSG8Q9UQ74 426 aa10.91□□□□□ -0.66
ATG4B-203ENST00000400772 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
ATG4B-203ENST00000400772 SMLR1H3BR10 107 aa10.9□□□□□ -0.66
ATG4B-203ENST00000400772 SLAQ13239 276 aa10.9□□□□□ -0.66
ATG4B-203ENST00000400772 C11orf21Q9P2W6 132 aa10.9□□□□□ -0.66
ATG4B-203ENST00000400772 CTXND1A0A1B0GTU2 59 aa10.89□□□□□ -0.67
ATG4B-203ENST00000400772 ARPC5O15511 151 aa10.89□□□□□ -0.67
ATG4B-203ENST00000400772 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
ATG4B-203ENST00000400772 ICOSQ9Y6W8 199 aa10.89□□□□□ -0.67
ATG4B-203ENST00000400772 DNAH5Q8TE73 4624 aa10.89□□□□□ -0.67
ATG4B-203ENST00000400772 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 A0A1W2PPQ1 181 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 M0R2P5 195 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 TAAR5O14804 337 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 FLI1Q01543 452 aaPredicted RBP10.88□□□□□ -0.67
ATG4B-203ENST00000400772 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 PRNTQ86SH4 94 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 CYB561D1Q8N8Q1 229 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 TMEM75Q8N9X5 138 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 NDFIP1Q9BT67 221 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 SDF2L1Q9HCN8 221 aa10.88□□□□□ -0.67
ATG4B-203ENST00000400772 TRAV4A0A0B4J268 109 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 K7EQD1 137 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 K7EQM0 130 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 GCGP01275 180 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 FGF8P55075 233 aaPredicted RBP10.87□□□□□ -0.67
ATG4B-203ENST00000400772 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 KCNS1Q96KK3 526 aa10.87□□□□□ -0.67
ATG4B-203ENST00000400772 TRAV34A0A0B4J273 112 aa10.86□□□□□ -0.67
ATG4B-203ENST00000400772 PFN1P07737 140 aaKnown RBP10.86□□□□□ -0.67
ATG4B-203ENST00000400772 MED14OSP0DP75 135 aa10.86□□□□□ -0.67
ATG4B-203ENST00000400772 UBE2G2P60604 165 aa10.86□□□□□ -0.67
ATG4B-203ENST00000400772 MRPL23Q16540 153 aaKnown RBP10.86□□□□□ -0.67
ATG4B-203ENST00000400772 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
ATG4B-203ENST00000400772 FAM74A7A6NL05 159 aa10.85□□□□□ -0.67
ATG4B-203ENST00000400772 NXPH4O95158 308 aa10.85□□□□□ -0.67
ATG4B-203ENST00000400772 SMUG1Q53HV7 270 aa10.85□□□□□ -0.67
ATG4B-203ENST00000400772 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
ATG4B-203ENST00000400772 OR4C5Q8NGB2 326 aa10.85□□□□□ -0.67
ATG4B-203ENST00000400772 FBLL1A6NHQ2 334 aaKnown RBP10.84□□□□□ -0.67
ATG4B-203ENST00000400772 SIVA1O15304 175 aa10.84□□□□□ -0.67
ATG4B-203ENST00000400772 GYPEP15421 78 aa10.84□□□□□ -0.67
ATG4B-203ENST00000400772 SAPCD1Q5SSQ6 148 aa10.84□□□□□ -0.67
ATG4B-203ENST00000400772 DPPA3Q6W0C5 159 aa10.84□□□□□ -0.67
ATG4B-203ENST00000400772 KCNRGQ8N5I3 272 aa10.84□□□□□ -0.67
ATG4B-203ENST00000400772 C9orf85Q96MD7 179 aa10.84□□□□□ -0.67
ATG4B-203ENST00000400772 MAP1LC3B2A6NCE7 125 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 PEX7O00628 323 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 RNASE3P12724 160 aaKnown RBP10.83□□□□□ -0.68
ATG4B-203ENST00000400772 FHITP49789 147 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 ZNF345Q14585 488 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 MAP1LC3BQ9GZQ8 125 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
ATG4B-203ENST00000400772 IGKV3D-20A0A0C4DH25 116 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 C9JCJ5 164 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 IFNA7P01567 189 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 ORM1P02763 201 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 GATA1P15976 413 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-203ENST00000400772 BTF3P20290 206 aaKnown RBP10.82□□□□□ -0.68
ATG4B-203ENST00000400772 SRIP30626 198 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 ZNF876PQ49A33 203 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 ZFP69Q49AA0 526 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-203ENST00000400772 HSPG2P98160 4391 aa10.82□□□□□ -0.68
ATG4B-203ENST00000400772 PGPEP1LA6NFU8 196 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 HMSDA8MTL9 139 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 RS1O15537 224 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 LINC00315P59091 139 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 CFAP126Q5VTH2 177 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 Q6ZRN7 208 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-203ENST00000400772 HIST1H2BAQ96A08 127 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 PTH2Q96A98 100 aa10.81□□□□□ -0.68
ATG4B-203ENST00000400772 CRIP1P50238 77 aa10.8□□□□□ -0.68
ATG4B-203ENST00000400772 Q86TA4 180 aa10.8□□□□□ -0.68
ATG4B-203ENST00000400772 PCNPQ8WW12 178 aaKnown RBP10.8□□□□□ -0.68
ATG4B-203ENST00000400772 TNFRSF18Q9Y5U5 241 aa10.8□□□□□ -0.68
ATG4B-203ENST00000400772 APOBP04114 4563 aaKnown RBP10.8□□□□□ -0.68
ATG4B-203ENST00000400772 FABP5P3A8MUU1 101 aa10.79□□□□□ -0.68
ATG4B-203ENST00000400772 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
ATG4B-203ENST00000400772 PPT1P50897 306 aa10.79□□□□□ -0.68
ATG4B-203ENST00000400772 ZNF506Q5JVG8 444 aa10.79□□□□□ -0.68
ATG4B-203ENST00000400772 COX8CQ7Z4L0 72 aa10.79□□□□□ -0.68
ATG4B-203ENST00000400772 IGHV3-73A0A0B4J1V6 119 aa10.78□□□□□ -0.68
ATG4B-203ENST00000400772 A0A0D9SG52 128 aa10.78□□□□□ -0.68
ATG4B-203ENST00000400772 C16orf90A8MZG2 172 aa10.78□□□□□ -0.68
ATG4B-203ENST00000400772 WFDC10BQ8IUB3 73 aa10.78□□□□□ -0.68
ATG4B-203ENST00000400772 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms