RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SPANXN1Q5VSR9 72 aa12.66□□□□□ -0.38
NUP50-202ENST00000396096 DCANP1Q8TF63 244 aa12.66□□□□□ -0.38
NUP50-202ENST00000396096 DPF1Q92782 380 aa12.66□□□□□ -0.38
NUP50-202ENST00000396096 H3BVH4 76 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 DEFB1P60022 68 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 KRTAP10-9P60411 292 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 Q8N8P6 123 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 OR2K2Q8NGT1 345 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 UTP20O75691 2785 aaKnown RBP12.65□□□□□ -0.38
NUP50-202ENST00000396096 CELSR2Q9HCU4 2923 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 ELANEP08246 267 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 FCER1GP30273 86 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 NRACQ8N912 160 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
NUP50-202ENST00000396096 F6UB75 175 aa12.64□□□□□ -0.39
NUP50-202ENST00000396096 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
NUP50-202ENST00000396096 EDN2P20800 178 aa12.64□□□□□ -0.39
NUP50-202ENST00000396096 STPG4Q8N801 248 aa12.64□□□□□ -0.39
NUP50-202ENST00000396096 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
NUP50-202ENST00000396096 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
NUP50-202ENST00000396096 ZNF702PQ9H963 129 aa12.64□□□□□ -0.39
NUP50-202ENST00000396096 PRRC2AP48634 2157 aaKnown RBP12.64□□□□□ -0.39
NUP50-202ENST00000396096 ASIPP42127 132 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 GOLT1BQ9Y3E0 138 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 ZFYVE26Q68DK2 2539 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 IGKV3-7A0A075B6H7 116 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 KLLNB2CW77 178 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
NUP50-202ENST00000396096 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
NUP50-202ENST00000396096 FXYD7P58549 80 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 ANXA2RQ3ZCQ2 193 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 Q5PR19 223 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 FBN2P35556 2912 aa12.63□□□□□ -0.39
NUP50-202ENST00000396096 J3KRW8 73 aa12.62□□□□□ -0.39
NUP50-202ENST00000396096 LGALS9O00182 355 aa12.62□□□□□ -0.39
NUP50-202ENST00000396096 LEPP41159 167 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 FAM208BQ5VWN6 2430 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 COX8AP10176 69 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 SRD5A1P18405 259 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 OR1N2Q8NGR9 330 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 UBE2E2Q96LR5 201 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
NUP50-202ENST00000396096 CRYBG3Q68DQ2 2970 aa12.6□□□□□ -0.39
NUP50-202ENST00000396096 ZNF25P17030 456 aaPredicted RBP12.6□□□□□ -0.39
NUP50-202ENST00000396096 S100A4P26447 101 aaKnown RBP12.6□□□□□ -0.39
NUP50-202ENST00000396096 HINT1P49773 126 aaPredicted RBP12.6□□□□□ -0.39
NUP50-202ENST00000396096 LRRK2Q5S007 2527 aa12.6□□□□□ -0.39
NUP50-202ENST00000396096 USP9YO00507 2555 aaPredicted RBP12.6□□□□□ -0.39
NUP50-202ENST00000396096 HOXA3O43365 443 aaPredicted RBP12.59□□□□□ -0.39
NUP50-202ENST00000396096 NXPH4O95158 308 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 TFPI2P48307 235 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 GAGE1Q13065 139 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 RNASE3P12724 160 aaKnown RBP12.59□□□□□ -0.39
NUP50-202ENST00000396096 Q8N2B8 174 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 EPG5Q9HCE0 2579 aa12.59□□□□□ -0.39
NUP50-202ENST00000396096 K7EQG2 157 aa12.58□□□□□ -0.4
NUP50-202ENST00000396096 TMEM158Q8WZ71 300 aa12.58□□□□□ -0.4
NUP50-202ENST00000396096 TMEM208Q9BTX3 173 aa12.58□□□□□ -0.4
NUP50-202ENST00000396096 SELENOKQ9Y6D0 94 aa12.58□□□□□ -0.4
NUP50-202ENST00000396096 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 A0A087WW49 117 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 M0R381 172 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 LAGE3Q14657 143 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 KRTAP1-3Q8IUG1 177 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
NUP50-202ENST00000396096 DLEU1O43261 78 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 GNRH2O43555 120 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 CD5LO43866 347 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 G0S2P27469 103 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 ANKRD39Q53RE8 183 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 Q96MF0 132 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
NUP50-202ENST00000396096 A0A0J9YX75 114 aa12.56□□□□□ -0.4
NUP50-202ENST00000396096 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
NUP50-202ENST00000396096 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
NUP50-202ENST00000396096 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
NUP50-202ENST00000396096 C20orf78Q9BR46 151 aa12.56□□□□□ -0.4
NUP50-202ENST00000396096 SMIM2Q9BVW6 85 aa12.56□□□□□ -0.4
NUP50-202ENST00000396096 POLQO75417 2590 aa12.56□□□□□ -0.4
NUP50-202ENST00000396096 FGF6P10767 208 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
NUP50-202ENST00000396096 C18orf15Q96N68 181 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 PTPN13Q12923 2485 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 ATP5LO75964 103 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 SMIM17P0DL12 118 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 ODF1Q14990 250 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 C12orf54Q6X4T0 127 aa12.55□□□□□ -0.4
NUP50-202ENST00000396096 RASL10AQ92737 203 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms