RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PCP4P48539 62 aa11.18□□□□□ -0.62
CCT4-201ENST00000394440 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
CCT4-201ENST00000394440 PACRGQ96M98 296 aaPredicted RBP11.18□□□□□ -0.62
CCT4-201ENST00000394440 C12orf57Q99622 126 aa11.18□□□□□ -0.62
CCT4-201ENST00000394440 AGRNO00468 2067 aa11.18□□□□□ -0.62
CCT4-201ENST00000394440 SORL1Q92673 2214 aa11.17□□□□□ -0.62
CCT4-201ENST00000394440 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
CCT4-201ENST00000394440 A0A0J9YX75 114 aa11.17□□□□□ -0.62
CCT4-201ENST00000394440 LOC102724200A0A096LPH7 203 aaPredicted RBP11.17□□□□□ -0.62
CCT4-201ENST00000394440 KLLNB2CW77 178 aa11.17□□□□□ -0.62
CCT4-201ENST00000394440 ODF3Q96PU9 254 aa11.17□□□□□ -0.62
CCT4-201ENST00000394440 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
CCT4-201ENST00000394440 FN1P02751 2386 aaKnown RBP11.17□□□□□ -0.62
CCT4-201ENST00000394440 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 CCL24O00175 119 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 PAFAH1B2P68402 229 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 BAGE3Q86Y29 109 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 TMEM18Q96B42 140 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 RCHY1Q96PM5 261 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 KIR3DS1Q14943 382 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 PYY3Q5JQD4 70 aa11.16□□□□□ -0.62
CCT4-201ENST00000394440 GPX1P07203 203 aa11.15□□□□□ -0.62
CCT4-201ENST00000394440 WNK1Q9H4A3 2382 aa11.15□□□□□ -0.62
CCT4-201ENST00000394440 A6NJY4 79 aa11.15□□□□□ -0.62
CCT4-201ENST00000394440 J3KRW8 73 aa11.15□□□□□ -0.62
CCT4-201ENST00000394440 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 CD33P20138 364 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 IQCJQ1A5X6 159 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 SNAI2O43623 268 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 NTF3P20783 257 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 MUC21Q5SSG8 566 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
CCT4-201ENST00000394440 NIPBLQ6KC79 2804 aaeCLIP11.14□□□□□ -0.63
CCT4-201ENST00000394440 TCF21O43680 179 aa11.13□□□□□ -0.63
CCT4-201ENST00000394440 OR5AL1P0C617 328 aa11.13□□□□□ -0.63
CCT4-201ENST00000394440 SIGLEC8Q9NYZ4 499 aa11.13□□□□□ -0.63
CCT4-201ENST00000394440 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
CCT4-201ENST00000394440 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
CCT4-201ENST00000394440 KCNS1Q96KK3 526 aa11.13□□□□□ -0.63
CCT4-201ENST00000394440 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 EBLN2Q6P2I7 272 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 A8MTW9 85 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 TWIST1Q15672 202 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 TMEM191AQ9H0A3 160 aa11.12□□□□□ -0.63
CCT4-201ENST00000394440 DUSP14O95147 198 aaKnown RBP11.11□□□□□ -0.63
CCT4-201ENST00000394440 ANXA2RQ3ZCQ2 193 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
CCT4-201ENST00000394440 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 LEPP41159 167 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 SSTP61278 116 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
CCT4-201ENST00000394440 CRLF1O75462 422 aa11.1□□□□□ -0.63
CCT4-201ENST00000394440 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
CCT4-201ENST00000394440 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
CCT4-201ENST00000394440 NAGKQ9UJ70 344 aa11.1□□□□□ -0.63
CCT4-201ENST00000394440 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
CCT4-201ENST00000394440 U3KQK5 164 aa11.1□□□□□ -0.63
CCT4-201ENST00000394440 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
CCT4-201ENST00000394440 DEFB131AP59861 70 aa11.1□□□□□ -0.63
CCT4-201ENST00000394440 JOSD1Q15040 202 aaPredicted RBP11.1□□□□□ -0.63
CCT4-201ENST00000394440 C7orf71A4D174 169 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 H3BVH4 76 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 ZNF324O75467 553 aaPredicted RBP11.09□□□□□ -0.63
CCT4-201ENST00000394440 MED14OSP0DP75 135 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
CCT4-201ENST00000394440 MAP6D1Q9H9H5 199 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 SCRT2Q9NQ03 307 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
CCT4-201ENST00000394440 CDKN1BP46527 198 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 CDPF1Q6NVV7 123 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 RNF185Q96GF1 192 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 ASIPP42127 132 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 CACNG7P62955 275 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 TDRG1Q3Y452 100 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 SAMD10Q9BYL1 202 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 NIT2Q9NQR4 276 aa11.08□□□□□ -0.64
CCT4-201ENST00000394440 OR4C46A6NHA9 309 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 M0R2Z0 102 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 RNASE3P12724 160 aaKnown RBP11.07□□□□□ -0.64
CCT4-201ENST00000394440 Q6ZWC4 215 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 MUC4Q99102 2169 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 TRAV12-3A0A0B4J271 114 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 D6R8Y8 96 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 H3BMM0 161 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 TSPOP30536 169 aa11.07□□□□□ -0.64
CCT4-201ENST00000394440 AMTP48728 403 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms