RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 STRCP1A6NGW2 1772 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 MYH11P35749 1972 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 COL24A1Q17RW2 1714 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 MYH3P11055 1940 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 KIAA2026Q5HYC2 2103 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 TRAV12-2A0A075B6T6 113 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 CCDC179H3BU77 68 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 SNAPC5O75971 98 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 IGHV3-30P01768 117 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 IGHV3-30-5P0DP03 117 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 KRTAP12-4P60329 112 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 RPL7L1Q6DKI1 246 aaKnown RBP0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 OR2T2Q6IF00 324 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 Q86TA4 180 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 SBSPONQ8IVN8 264 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 PPDPFLQ8WWR9 84 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 SPTSSAQ969W0 71 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 IFI27L1Q96BM0 104 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 DMAC1Q96GE9 116 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 GNG8Q9UK08 70 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 ADGRB2O60241 1585 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 MYH2Q9UKX2 1941 aa0.7□□□□□ -2.3
SNORA48.1-201ENST00000390879 TRAV2A0A0B4J234 112 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 TRBV10-1A0A0K0K1A3 114 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 CXorf51AA0A1B0GTR3 108 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 SPAARA0A1B0GVQ0 90 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 A6NIN4 97 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 HIGD1CA8MV81 97 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 APODP05090 189 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 AKAIN1P0CW23 69 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 PIPP12273 146 aaPredicted RBP0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 S100A1P23297 94 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 EFNA4P52798 201 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 UBE2G1P62253 170 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 LCE1CQ5T751 118 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 LCE1BQ5T7P3 118 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 SPANXN1Q5VSR9 72 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 AMELYQ99218 206 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 AGPAT4-IT1Q9H0P7 198 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 SCN3BQ9NY72 215 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 MRPL35Q9NZE8 188 aaKnown RBP0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 ZFHX2Q9C0A1 2572 aaPredicted RBP0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 CCDC88CQ9P219 2028 aa0.69□□□□□ -2.3
SNORA48.1-201ENST00000390879 UHRF1BP1LA0JNW5 1464 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 GRIN2AQ12879 1464 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 TCRBV3S1A0A5B6 114 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 F6UZH7 168 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 NDUFB6O95139 128 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 APOC1P02654 83 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 ANGP03950 147 aaKnown RBP0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 NUP210LQ5VU65 1888 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 Q6ZQY7 126 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 SPTSSBQ8NFR3 76 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 NUP210Q8TEM1 1887 aaPredicted RBP0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 TSKUQ8WUA8 353 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 COPS9Q8WXC6 57 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 LSM10Q969L4 123 aaKnown RBP0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 TMEM141Q96I45 108 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 CCL19Q99731 98 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 SNRNP25Q9BV90 132 aaKnown RBP0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 NCOA3Q9Y6Q9 1424 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 PTPRBP23467 1997 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 TMEM2Q9UHN6 1383 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 MPDZO75970 2070 aa0.68□□□□□ -2.3
SNORA48.1-201ENST00000390879 MYO9BQ13459 2157 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 HEATR5AQ86XA9 2040 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 GBF1Q92538 1859 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 ICE1Q9Y2F5 2266 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 TRAV12-3A0A0B4J271 114 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 TRBV30A0A0K0K1B3 111 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 NBDYA0A0U1RRE5 68 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 MIF4GDA9UHW6 222 aaKnown RBP0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 FXYD1O00168 92 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 IFNGP01579 166 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 FGF7P21781 194 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 NPC2P61916 151 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 RBM3P98179 157 aaKnown RBP0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 FXYD3Q14802 87 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 ZNF56Q15929 161 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 C9orf116Q5BN46 136 aaPredicted RBP0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 XAF1Q6GPH4 301 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 SLC48A1Q6P1K1 146 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 C10orf82Q8WW14 230 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 PP6455Q8WZ26 134 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 RERGLQ9H628 205 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 NAA60Q9H7X0 242 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 RPRMQ9NS64 109 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 SERP1Q9Y6X1 66 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 COL4A1P02462 1669 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 LAMB2P55268 1798 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 PLXNA3P51805 1871 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 FER1L6Q2WGJ9 1857 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 BAHCC1Q9P281 2608 aa0.67□□□□□ -2.3
SNORA48.1-201ENST00000390879 DOCK10Q96BY6 2186 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 BAZ2BQ9UIF8 2168 aaKnown RBP0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
SNORA48.1-201ENST00000390879 USP54Q70EL1 1684 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms